Analysis of interatomic Contacts of Structural Units in PDB entry:
6LFZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LFZ entry

There are 2 chains in PDB entry 6LFZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 9LEU 455
B
 GLN 9ILE 457
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 6LFZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 37Right-handed alpha
Helix 2
AA2
A
51 65Right-handed alpha
Helix 3
AA3
A
89 101Right-handed alpha
Helix 4
AA4
A
103 111Right-handed alpha
Helix 5
AA5
A
124 136Right-handed alpha
Helix 6
AA6
A
146 160Right-handed alpha
Helix 7
AA7
A
161 166Right-handed 310
Helix 8
AA8
A
183 185Right-handed 310
Helix 9
AA9
A
186 191Right-handed 310
Helix 10
AB1
A
194 206Right-handed alpha
Helix 11
AB2
A
207 210Right-handed 310
Helix 12
AB3
A
222 232Right-handed alpha
Helix 13
AB4
A
255 260Right-handed alpha
Helix 14
AB5
A
278 293Right-handed alpha
Helix 15
AB6
A
318 326Right-handed alpha
Helix 16
AB7
A
337 344Right-handed alpha
Helix 17
AB8
A
355 366Right-handed alpha
Helix 18
AB9
A
377 388Right-handed alpha
Helix 19
AC1
A
395 398Right-handed 310
Helix 20
AC2
A
406 420Right-handed alpha
Helix 21
AC3
A
420 438Right-handed alpha
Helix 22
AC4
A
442 454Right-handed alpha
Helix 23
AC5
B
20 37Right-handed alpha
Helix 24
AC6
B
51 65Right-handed alpha
Helix 25
AC7
B
89 100Right-handed alpha
Helix 26
AC8
B
103 111Right-handed alpha
Helix 27
AC9
B
122 125Right-handed 310
Helix 28
AD1
B
128 136Right-handed alpha
Helix 29
AD2
B
146 162Right-handed alpha
Helix 30
AD3
B
165 169Right-handed 310
Helix 31
AD4
B
183 185Right-handed 310
Helix 32
AD5
B
186 191Right-handed alpha
Helix 33
AD6
B
194 206Right-handed alpha
Helix 34
AD7
B
207 209Right-handed 310
Helix 35
AD8
B
222 232Right-handed alpha
Helix 36
AD9
B
255 261Right-handed alpha
Helix 37
AE1
B
278 293Right-handed alpha
Helix 38
AE2
B
318 325Right-handed alpha
Helix 39
AE3
B
337 343Right-handed alpha
Helix 40
AE4
B
355 366Right-handed alpha
Helix 41
AE5
B
377 388Right-handed alpha
Helix 42
AE6
B
395 398Right-handed 310
Helix 43
AE7
B
406 420Right-handed alpha
Helix 44
AE8
B
420 438Right-handed alpha
Helix 45
AE9
B
442 455Right-handed alpha
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There are 6 sheets in PDB entry 6LFZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 74first strand
Strand 2
A
40 47parallel
Strand 3
A
12 16parallel
Strand 4
A
117 120parallel
Strand 5
A
139 143parallel
Strand 6
A
213 215parallel
Strand 7
A
237 239parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 172first strand
Strand 2
A
180 181anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 333first strand
Strand 2
A
295 300parallel
Strand 3
A
266 270parallel
Strand 4
A
347 352parallel
Strand 5
A
369 371parallel
Strand 6
A
391 393parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 74first strand
Strand 2
B
40 47parallel
Strand 3
B
12 16parallel
Strand 4
B
117 120parallel
Strand 5
B
139 143parallel
Strand 6
B
212 215parallel
Strand 7
B
237 239parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
171 172first strand
Strand 2
B
180 181anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
329 333first strand
Strand 2
B
295 300parallel
Strand 3
B
266 270parallel
Strand 4
B
347 352parallel
Strand 5
B
369 371parallel
Strand 6
B
391 393parallel
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