Analysis of interatomic Contacts of Structural Units in PDB entry:
6LG0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6LG0 entry

There are 6 chains in PDB entry 6LG0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 10	ASN 454
B	VAL 10	ASN 454
C	GLY 11	ASN 454
D	VAL 10	ASN 454
E	ALA 12	ASN 454
F	ASN 9	ASN 454

There are126 helices in PDB entry 6LG0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	21	38	Right-handed alpha
Helix 2	AA2	A	52	66	Right-handed alpha
Helix 3	AA3	A	88	97	Right-handed alpha
Helix 4	AA4	A	100	102	Right-handed 310
Helix 5	AA5	A	103	111	Right-handed alpha
Helix 6	AA6	A	124	135	Right-handed alpha
Helix 7	AA7	A	146	160	Right-handed alpha
Helix 8	AA8	A	184	188	Right-handed 310
Helix 9	AA9	A	192	204	Right-handed alpha
Helix 10	AB1	A	220	229	Right-handed alpha
Helix 11	AB2	A	252	258	Right-handed alpha
Helix 12	AB3	A	275	290	Right-handed alpha
Helix 13	AB4	A	315	322	Right-handed alpha
Helix 14	AB5	A	334	341	Right-handed alpha
Helix 15	AB6	A	352	363	Right-handed alpha
Helix 16	AB7	A	374	386	Right-handed alpha
Helix 17	AB8	A	392	395	Right-handed 310
Helix 18	AB9	A	403	417	Right-handed alpha
Helix 19	AC1	A	417	436	Right-handed alpha
Helix 20	AC2	A	439	452	Right-handed alpha
Helix 21	AC3	B	21	38	Right-handed alpha
Helix 22	AC4	B	52	66	Right-handed alpha
Helix 23	AC5	B	88	101	Right-handed alpha
Helix 24	AC6	B	103	110	Right-handed alpha
Helix 25	AC7	B	124	135	Right-handed alpha
Helix 26	AC8	B	146	155	Right-handed alpha
Helix 27	AC9	B	155	163	Right-handed alpha
Helix 28	AD1	B	184	189	Right-handed alpha
Helix 29	AD2	B	192	204	Right-handed alpha
Helix 30	AD3	B	205	207	Right-handed 310
Helix 31	AD4	B	220	229	Right-handed alpha
Helix 32	AD5	B	252	258	Right-handed alpha
Helix 33	AD6	B	275	290	Right-handed alpha
Helix 34	AD7	B	315	322	Right-handed alpha
Helix 35	AD8	B	334	340	Right-handed alpha
Helix 36	AD9	B	352	363	Right-handed alpha
Helix 37	AE1	B	374	386	Right-handed alpha
Helix 38	AE2	B	392	395	Right-handed 310
Helix 39	AE3	B	403	417	Right-handed alpha
Helix 40	AE4	B	417	436	Right-handed alpha
Helix 41	AE5	B	439	452	Right-handed alpha
Helix 42	AE6	C	21	38	Right-handed alpha
Helix 43	AE7	C	52	66	Right-handed alpha
Helix 44	AE8	C	88	100	Right-handed alpha
Helix 45	AE9	C	103	109	Right-handed alpha
Helix 46	AF1	C	122	132	Right-handed alpha
Helix 47	AF2	C	146	155	Right-handed alpha
Helix 48	AF3	C	155	160	Right-handed alpha
Helix 49	AF4	C	181	183	Right-handed 310
Helix 50	AF5	C	184	189	Right-handed 310
Helix 51	AF6	C	192	204	Right-handed alpha
Helix 52	AF7	C	205	208	Right-handed 310
Helix 53	AF8	C	220	229	Right-handed alpha
Helix 54	AF9	C	252	257	Right-handed alpha
Helix 55	AG1	C	275	290	Right-handed alpha
Helix 56	AG2	C	315	323	Right-handed alpha
Helix 57	AG3	C	334	341	Right-handed alpha
Helix 58	AG4	C	352	362	Right-handed alpha
Helix 59	AG5	C	374	385	Right-handed alpha
Helix 60	AG6	C	392	395	Right-handed 310
Helix 61	AG7	C	403	417	Right-handed alpha
Helix 62	AG8	C	417	436	Right-handed alpha
Helix 63	AG9	C	439	452	Right-handed alpha
Helix 64	AH1	D	21	38	Right-handed alpha
Helix 65	AH2	D	52	66	Right-handed alpha
Helix 66	AH3	D	88	100	Right-handed alpha
Helix 67	AH4	D	103	111	Right-handed alpha
Helix 68	AH5	D	124	135	Right-handed alpha
Helix 69	AH6	D	146	155	Right-handed alpha
Helix 70	AH7	D	155	164	Right-handed alpha
Helix 71	AH8	D	184	189	Right-handed alpha
Helix 72	AH9	D	192	205	Right-handed alpha
Helix 73	AI1	D	220	230	Right-handed alpha
Helix 74	AI2	D	252	257	Right-handed alpha
Helix 75	AI3	D	275	290	Right-handed alpha
Helix 76	AI4	D	315	322	Right-handed alpha
Helix 77	AI5	D	334	340	Right-handed alpha
Helix 78	AI6	D	352	363	Right-handed alpha
Helix 79	AI7	D	374	386	Right-handed alpha
Helix 80	AI8	D	392	395	Right-handed 310
Helix 81	AI9	D	403	417	Right-handed alpha
Helix 82	AJ1	D	417	436	Right-handed alpha
Helix 83	AJ2	D	439	452	Right-handed alpha
Helix 84	AJ3	E	21	38	Right-handed alpha
Helix 85	AJ4	E	52	66	Right-handed alpha
Helix 86	AJ5	E	88	101	Right-handed alpha
Helix 87	AJ6	E	104	110	Right-handed alpha
Helix 88	AJ7	E	124	132	Right-handed alpha
Helix 89	AJ8	E	146	162	Right-handed alpha
Helix 90	AJ9	E	184	189	Right-handed alpha
Helix 91	AK1	E	192	204	Right-handed alpha
Helix 92	AK2	E	205	208	Right-handed 310
Helix 93	AK3	E	220	230	Right-handed alpha
Helix 94	AK4	E	252	258	Right-handed alpha
Helix 95	AK5	E	275	290	Right-handed alpha
Helix 96	AK6	E	315	323	Right-handed alpha
Helix 97	AK7	E	334	341	Right-handed alpha
Helix 98	AK8	E	352	363	Right-handed alpha
Helix 99	AK9	E	374	385	Right-handed alpha
Helix 100	AL1	E	392	395	Right-handed 310
Helix 101	AL2	E	403	417	Right-handed alpha
Helix 102	AL3	E	417	436	Right-handed alpha
Helix 103	AL4	E	439	453	Right-handed alpha
Helix 104	AL5	F	21	38	Right-handed alpha
Helix 105	AL6	F	52	66	Right-handed alpha
Helix 106	AL7	F	88	100	Right-handed alpha
Helix 107	AL8	F	101	103	Right-handed 310
Helix 108	AL9	F	104	111	Right-handed alpha
Helix 109	AM1	F	122	134	Right-handed alpha
Helix 110	AM2	F	146	162	Right-handed alpha
Helix 111	AM3	F	181	183	Right-handed 310
Helix 112	AM4	F	184	189	Right-handed alpha
Helix 113	AM5	F	192	204	Right-handed alpha
Helix 114	AM6	F	205	208	Right-handed 310
Helix 115	AM7	F	220	230	Right-handed alpha
Helix 116	AM8	F	254	258	Right-handed 310
Helix 117	AM9	F	275	290	Right-handed alpha
Helix 118	AN1	F	310	314	Right-handed 310
Helix 119	AN2	F	315	322	Right-handed alpha
Helix 120	AN3	F	334	341	Right-handed alpha
Helix 121	AN4	F	352	362	Right-handed alpha
Helix 122	AN5	F	374	385	Right-handed alpha
Helix 123	AN6	F	392	395	Right-handed 310
Helix 124	AN7	F	403	417	Right-handed alpha
Helix 125	AN8	F	418	436	Right-handed alpha
Helix 126	AN9	F	439	453	Right-handed alpha

There are 18 sheets in PDB entry 6LG0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	70	75	first strand
Strand 2	A	40	48	parallel
Strand 3	A	12	17	parallel
Strand 4	A	117	120	parallel
Strand 5	A	139	143	parallel
Strand 6	A	211	213	parallel
Strand 7	A	235	237	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	169	170	first strand
Strand 2	A	178	179	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	326	330	first strand
Strand 2	A	292	297	parallel
Strand 3	A	263	267	parallel
Strand 4	A	344	349	parallel
Strand 5	A	366	368	parallel
Strand 6	A	388	390	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	70	75	first strand
Strand 2	B	40	48	parallel
Strand 3	B	12	17	parallel
Strand 4	B	117	120	parallel
Strand 5	B	138	143	parallel
Strand 6	B	210	213	parallel
Strand 7	B	235	236	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	170	first strand
Strand 2	B	178	179	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	326	330	first strand
Strand 2	B	292	297	parallel
Strand 3	B	263	267	parallel
Strand 4	B	344	349	parallel
Strand 5	B	366	368	parallel
Strand 6	B	388	390	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	70	75	first strand
Strand 2	C	41	48	parallel
Strand 3	C	13	17	parallel
Strand 4	C	115	121	parallel
Strand 5	C	138	143	parallel
Strand 6	C	210	213	parallel
Strand 7	C	235	237	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	169	172	first strand
Strand 2	C	175	179	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	326	329	first strand
Strand 2	C	292	296	parallel
Strand 3	C	263	267	parallel
Strand 4	C	344	349	parallel
Strand 5	C	366	368	parallel
Strand 6	C	388	390	parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	70	75	first strand
Strand 2	D	40	48	parallel
Strand 3	D	12	17	parallel
Strand 4	D	117	121	parallel
Strand 5	D	138	143	parallel
Strand 6	D	210	213	parallel
Strand 7	D	235	237	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	169	172	first strand
Strand 2	D	175	179	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	326	330	first strand
Strand 2	D	292	297	parallel
Strand 3	D	263	267	parallel
Strand 4	D	344	349	parallel
Strand 5	D	366	368	parallel
Strand 6	D	388	390	parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	70	75	first strand
Strand 2	E	41	48	parallel
Strand 3	E	13	17	parallel
Strand 4	E	117	121	parallel
Strand 5	E	138	142	parallel
Strand 6	E	210	213	parallel
Strand 7	E	235	237	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	169	170	first strand
Strand 2	E	178	179	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	326	329	first strand
Strand 2	E	292	296	parallel
Strand 3	E	263	266	parallel
Strand 4	E	344	349	parallel
Strand 5	E	366	368	parallel
Strand 6	E	388	390	parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	70	75	first strand
Strand 2	F	41	48	parallel
Strand 3	F	13	17	parallel
Strand 4	F	117	121	parallel
Strand 5	F	138	143	parallel
Strand 6	F	210	213	parallel
Strand 7	F	235	237	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	169	171	first strand
Strand 2	F	177	179	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	326	330	first strand
Strand 2	F	292	297	parallel
Strand 3	F	263	267	parallel
Strand 4	F	344	349	parallel
Strand 5	F	366	368	parallel
Strand 6	F	388	390	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6LG0

Analysis of interatomic Contacts of Structural Units in PDB entry:
6LG0