Analysis of interatomic Contacts of Structural Units in PDB entry:
6LG1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LG1 entry

There are 2 chains in PDB entry 6LG1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 27SER 482
B
 ALA 27SER 482
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 6LG1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 55Right-handed alpha
Helix 2
AA2
A
69 83Right-handed alpha
Helix 3
AA3
A
97 101Right-handed 310
Helix 4
AA4
A
105 117Right-handed alpha
Helix 5
AA5
A
117 128Right-handed alpha
Helix 6
AA6
A
141 152Right-handed alpha
Helix 7
AA7
A
163 178Right-handed alpha
Helix 8
AA8
A
194 198Right-handed 310
Helix 9
AA9
A
199 204Right-handed 310
Helix 10
AB1
A
207 223Right-handed alpha
Helix 11
AB2
A
235 246Right-handed alpha
Helix 12
AB3
A
273 281Right-handed alpha
Helix 13
AB4
A
298 313Right-handed alpha
Helix 14
AB5
A
343 348Right-handed alpha
Helix 15
AB6
A
360 367Right-handed alpha
Helix 16
AB7
A
378 389Right-handed alpha
Helix 17
AB8
A
400 412Right-handed alpha
Helix 18
AB9
A
430 444Right-handed alpha
Helix 19
AC1
A
444 463Right-handed alpha
Helix 20
AC2
A
466 480Right-handed alpha
Helix 21
AC3
B
38 55Right-handed alpha
Helix 22
AC4
B
69 83Right-handed alpha
Helix 23
AC5
B
105 117Right-handed alpha
Helix 24
AC6
B
117 128Right-handed alpha
Helix 25
AC7
B
141 152Right-handed alpha
Helix 26
AC8
B
163 179Right-handed alpha
Helix 27
AC9
B
194 198Right-handed 310
Helix 28
AD1
B
199 204Right-handed 310
Helix 29
AD2
B
207 223Right-handed alpha
Helix 30
AD3
B
235 245Right-handed alpha
Helix 31
AD4
B
269 273Right-handed 310
Helix 32
AD5
B
274 281Right-handed alpha
Helix 33
AD6
B
298 313Right-handed alpha
Helix 34
AD7
B
343 349Right-handed alpha
Helix 35
AD8
B
360 366Right-handed alpha
Helix 36
AD9
B
378 389Right-handed alpha
Helix 37
AE1
B
400 411Right-handed alpha
Helix 38
AE2
B
430 444Right-handed alpha
Helix 39
AE3
B
444 463Right-handed alpha
Helix 40
AE4
B
466 480Right-handed alpha
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There are 5 sheets in PDB entry 6LG1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 92first strand
Strand 2
A
58 65parallel
Strand 3
A
30 34parallel
Strand 4
A
134 138parallel
Strand 5
A
156 160parallel
Strand 6
A
225 228parallel
Strand 7
A
254 256parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 355first strand
Strand 2
A
315 319parallel
Strand 3
A
286 290parallel
Strand 4
A
370 375parallel
Strand 5
A
391 394parallel
Strand 6
A
414 415parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 92first strand
Strand 2
B
58 65parallel
Strand 3
B
30 34parallel
Strand 4
B
134 138parallel
Strand 5
B
156 160parallel
Strand 6
B
225 228parallel
Strand 7
B
254 256parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
246 247first strand
Strand 2
B
251 252anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
352 355first strand
Strand 2
B
315 319parallel
Strand 3
B
286 290parallel
Strand 4
B
370 375parallel
Strand 5
B
391 394parallel
Strand 6
B
414 415parallel
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