Analysis of interatomic Contacts of Structural Units in PDB entry:
6LHR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6LHR entry

There are 4 chains in PDB entry 6LHR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 46	GLY 388
B	PRO 46	PRO 389
C	PRO 46	PRO 389
D	PRO 46	GLY 388

There are 52 helices in PDB entry 6LHR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	58	60	Right-handed 310
Helix 2	AA2	A	89	97	Right-handed alpha
Helix 3	AA3	A	162	181	Right-handed alpha
Helix 4	AA4	A	199	211	Right-handed alpha
Helix 5	AA5	A	222	233	Right-handed alpha
Helix 6	AA6	A	244	253	Right-handed alpha
Helix 7	AA7	A	266	275	Right-handed alpha
Helix 8	AA8	A	287	291	Right-handed 310
Helix 9	AA9	A	297	307	Right-handed alpha
Helix 10	AB1	A	313	319	Right-handed alpha
Helix 11	AB2	A	327	332	Right-handed 310
Helix 12	AB3	A	334	351	Right-handed alpha
Helix 13	AB4	A	366	376	Right-handed alpha
Helix 14	AB5	B	58	60	Right-handed 310
Helix 15	AB6	B	89	97	Right-handed alpha
Helix 16	AB7	B	162	181	Right-handed alpha
Helix 17	AB8	B	199	211	Right-handed alpha
Helix 18	AB9	B	225	233	Right-handed alpha
Helix 19	AC1	B	244	253	Right-handed alpha
Helix 20	AC2	B	266	274	Right-handed alpha
Helix 21	AC3	B	287	291	Right-handed 310
Helix 22	AC4	B	303	307	Right-handed 310
Helix 23	AC5	B	313	320	Right-handed alpha
Helix 24	AC6	B	327	332	Right-handed 310
Helix 25	AC7	B	334	351	Right-handed alpha
Helix 26	AC8	B	366	376	Right-handed alpha
Helix 27	AC9	C	58	60	Right-handed 310
Helix 28	AD1	C	89	97	Right-handed alpha
Helix 29	AD2	C	162	181	Right-handed alpha
Helix 30	AD3	C	199	211	Right-handed alpha
Helix 31	AD4	C	224	233	Right-handed alpha
Helix 32	AD5	C	244	253	Right-handed alpha
Helix 33	AD6	C	266	275	Right-handed alpha
Helix 34	AD7	C	287	291	Right-handed 310
Helix 35	AD8	C	297	307	Right-handed alpha
Helix 36	AD9	C	313	319	Right-handed alpha
Helix 37	AE1	C	327	332	Right-handed 310
Helix 38	AE2	C	334	351	Right-handed alpha
Helix 39	AE3	C	366	376	Right-handed alpha
Helix 40	AE4	D	58	60	Right-handed 310
Helix 41	AE5	D	89	97	Right-handed alpha
Helix 42	AE6	D	162	181	Right-handed alpha
Helix 43	AE7	D	199	211	Right-handed alpha
Helix 44	AE8	D	225	233	Right-handed alpha
Helix 45	AE9	D	244	253	Right-handed alpha
Helix 46	AF1	D	266	275	Right-handed alpha
Helix 47	AF2	D	287	291	Right-handed 310
Helix 48	AF3	D	302	307	Right-handed 310
Helix 49	AF4	D	313	320	Right-handed alpha
Helix 50	AF5	D	327	332	Right-handed 310
Helix 51	AF6	D	334	351	Right-handed alpha
Helix 52	AF7	D	366	376	Right-handed alpha

There are 16 sheets in PDB entry 6LHR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	53	first strand
Strand 2	A	62	68	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	146	150	first strand
Strand 2	A	78	88	anti-parallel
Strand 3	A	113	121	anti-parallel
Strand 4	A	133	137	anti-parallel
Strand 5	A	154	156	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	146	150	first strand
Strand 2	A	78	88	anti-parallel
Strand 3	A	382	386	anti-parallel
Strand 4	A	358	363	parallel

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There are 12 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	236	238	first strand
Strand 2	A	216	220	parallel
Strand 3	A	191	194	parallel
Strand 4	A	257	262	parallel
Strand 5	A	276	284	parallel
Strand 6	A	321	325	parallel
Strand 7	B	321	325	anti-parallel
Strand 8	B	276	284	parallel
Strand 9	B	257	262	parallel
Strand 10	B	191	194	parallel
Strand 11	B	216	220	parallel
Strand 12	B	236	238	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	310	312	first strand
Strand 2	B	310	312	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	53	first strand
Strand 2	B	62	68	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	150	first strand
Strand 2	B	78	88	anti-parallel
Strand 3	B	113	121	anti-parallel
Strand 4	B	133	137	anti-parallel
Strand 5	B	154	156	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	150	first strand
Strand 2	B	78	88	anti-parallel
Strand 3	B	382	386	anti-parallel
Strand 4	B	358	363	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	53	first strand
Strand 2	C	62	68	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	146	150	first strand
Strand 2	C	78	88	anti-parallel
Strand 3	C	113	121	anti-parallel
Strand 4	C	133	137	anti-parallel
Strand 5	C	154	156	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	146	150	first strand
Strand 2	C	78	88	anti-parallel
Strand 3	C	382	386	anti-parallel
Strand 4	C	358	363	parallel

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There are 12 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	236	238	first strand
Strand 2	C	216	220	parallel
Strand 3	C	191	195	parallel
Strand 4	C	257	262	parallel
Strand 5	C	276	284	parallel
Strand 6	C	321	325	parallel
Strand 7	D	321	325	anti-parallel
Strand 8	D	276	284	parallel
Strand 9	D	257	262	parallel
Strand 10	D	191	194	parallel
Strand 11	D	216	220	parallel
Strand 12	D	236	238	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	310	312	first strand
Strand 2	D	310	312	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	47	53	first strand
Strand 2	D	62	68	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	146	150	first strand
Strand 2	D	78	88	anti-parallel
Strand 3	D	113	121	anti-parallel
Strand 4	D	133	137	anti-parallel
Strand 5	D	154	156	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	146	150	first strand
Strand 2	D	78	88	anti-parallel
Strand 3	D	382	386	anti-parallel
Strand 4	D	358	363	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6LHR

Analysis of interatomic Contacts of Structural Units in PDB entry:
6LHR