Analysis of interatomic Contacts of Structural Units in PDB entry:
6LHY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LHY entry

There are 2 chains in PDB entry 6LHY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3ASN 192
B
 ALA 2ASN 192
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6LHY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 16Right-handed alpha
Helix 2
AA2
A
18 28Right-handed alpha
Helix 3
AA3
A
53 63Right-handed alpha
Helix 4
AA4
A
75 78Right-handed 310
Helix 5
AA5
A
79 93Right-handed alpha
Helix 6
AA6
A
117 120Right-handed 310
Helix 7
AA7
A
159 163Right-handed 310
Helix 8
AA8
A
170 172Right-handed 310
Helix 9
AA9
A
182 191Right-handed alpha
Helix 10
AB1
B
11 16Right-handed alpha
Helix 11
AB2
B
18 28Right-handed alpha
Helix 12
AB3
B
53 63Right-handed alpha
Helix 13
AB4
B
75 78Right-handed 310
Helix 14
AB5
B
79 92Right-handed alpha
Helix 15
AB6
B
117 120Right-handed 310
Helix 16
AB7
B
159 163Right-handed 310
Helix 17
AB8
B
170 172Right-handed 310
Helix 18
AB9
B
182 192Right-handed alpha
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There are 6 sheets in PDB entry 6LHY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 35first strand
Strand 2
A
5 8parallel
Strand 3
A
67 72parallel
Strand 4
A
95 100parallel
Strand 5
A
174 177parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 145first strand
Strand 2
A
132 138anti-parallel
Strand 3
A
152 153anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 145first strand
Strand 2
A
132 138anti-parallel
Strand 3
A
122 126anti-parallel
Strand 4
A
166 168anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 35first strand
Strand 2
B
4 8parallel
Strand 3
B
67 72parallel
Strand 4
B
95 100parallel
Strand 5
B
174 177parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
143 145first strand
Strand 2
B
132 138anti-parallel
Strand 3
B
152 153anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
143 145first strand
Strand 2
B
132 138anti-parallel
Strand 3
B
122 126anti-parallel
Strand 4
B
166 168anti-parallel
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