Analysis of interatomic Contacts of Structural Units in PDB entry:
6LI2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LI2 entry

There is 1 chain in PDB entry 6LI2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 23VAL 605
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6LI2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 65Right-handed alpha
Helix 2
AA2
A
74 94Right-handed alpha
Helix 3
AA3
A
94 101Right-handed alpha
Helix 4
AA4
A
109 145Right-handed alpha
Helix 5
AA5
A
148 153Right-handed alpha
Helix 6
AA6
A
156 173Right-handed alpha
Helix 7
AA7
A
174 179Right-handed 310
Helix 8
AA8
A
190 196Right-handed alpha
Helix 9
AA9
A
200 211Right-handed alpha
Helix 10
AB1
A
211 231Right-handed alpha
Helix 11
AB2
A
1019 1023Right-handed 310
Helix 12
AB3
A
1029 1033Right-handed 310
Helix 13
AB4
A
1045 1047Right-handed 310
Helix 14
AB5
A
1054 278Right-handed alpha
Helix 15
AB6
A
278 290Right-handed alpha
Helix 16
AB7
A
295 308Right-handed alpha
Helix 17
AB8
A
308 321Right-handed alpha
Helix 18
AB9
A
321 603Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6LI2.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1012 1013first strand
Strand 2
A
1004 1006anti-parallel
Strand 3
A
1049 1051anti-parallel
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