Analysis of interatomic Contacts of Structural Units in PDB entry:
6LKP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LKP entry

There are 6 chains in PDB entry 6LKP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 7ALA 177
B
 THR 10ALA 177
C
 SER 6ALA 177
D
 ILE 8ALA 177
E
 PRO 7SER 173
F
 ASN 17SER 173
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 6LKP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 54Right-handed alpha
Helix 2
AA2
A
58 87Right-handed alpha
Helix 3
AA3
A
94 101Right-handed alpha
Helix 4
AA4
A
113 142Right-handed alpha
Helix 5
AA5
A
144 169Right-handed alpha
Helix 6
AA6
B
22 54Right-handed alpha
Helix 7
AA7
B
58 87Right-handed alpha
Helix 8
AA8
B
94 101Right-handed alpha
Helix 9
AA9
B
113 142Right-handed alpha
Helix 10
AB1
B
144 169Right-handed alpha
Helix 11
AB2
C
25 54Right-handed alpha
Helix 12
AB3
C
58 88Right-handed alpha
Helix 13
AB4
C
94 101Right-handed alpha
Helix 14
AB5
C
113 142Right-handed alpha
Helix 15
AB6
C
144 169Right-handed alpha
Helix 16
AB7
D
22 54Right-handed alpha
Helix 17
AB8
D
58 88Right-handed alpha
Helix 18
AB9
D
94 101Right-handed alpha
Helix 19
AC1
D
113 142Right-handed alpha
Helix 20
AC2
D
144 169Right-handed alpha
Helix 21
AC3
E
22 54Right-handed alpha
Helix 22
AC4
E
58 88Right-handed alpha
Helix 23
AC5
E
94 102Right-handed alpha
Helix 24
AC6
E
113 142Right-handed alpha
Helix 25
AC7
E
144 169Right-handed alpha
Helix 26
AC8
F
22 54Right-handed alpha
Helix 27
AC9
F
58 87Right-handed alpha
Helix 28
AD1
F
113 142Right-handed alpha
Helix 29
AD2
F
144 169Right-handed alpha
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There are no sheets in PDB entry 6LKP
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il