Analysis of interatomic Contacts of Structural Units in PDB entry:
6LL7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LL7 entry

There are 4 chains in PDB entry 6LL7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2LYS 307
B
 SER 2LYS 307
C
 SER 2LYS 307
D
 SER 2LYS 307
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 6LL7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 29Right-handed alpha
Helix 2
AA2
A
42 53Right-handed alpha
Helix 3
AA3
A
82 86Right-handed 310
Helix 4
AA4
A
115 128Right-handed alpha
Helix 5
AA5
A
132 148Right-handed alpha
Helix 6
AA6
A
156 171Right-handed alpha
Helix 7
AA7
A
174 188Right-handed alpha
Helix 8
AA8
A
193 200Right-handed alpha
Helix 9
AA9
A
221 226Right-handed 310
Helix 10
AB1
A
228 243Right-handed alpha
Helix 11
AB2
A
270 277Right-handed alpha
Helix 12
AB3
A
292 297Right-handed alpha
Helix 13
AB4
A
297 307Right-handed alpha
Helix 14
AB5
B
12 29Right-handed alpha
Helix 15
AB6
B
42 53Right-handed alpha
Helix 16
AB7
B
82 86Right-handed 310
Helix 17
AB8
B
115 128Right-handed alpha
Helix 18
AB9
B
132 148Right-handed alpha
Helix 19
AC1
B
156 171Right-handed alpha
Helix 20
AC2
B
174 188Right-handed alpha
Helix 21
AC3
B
193 200Right-handed alpha
Helix 22
AC4
B
221 226Right-handed 310
Helix 23
AC5
B
228 243Right-handed alpha
Helix 24
AC6
B
270 277Right-handed alpha
Helix 25
AC7
B
292 297Right-handed alpha
Helix 26
AC8
B
297 307Right-handed alpha
Helix 27
AC9
C
12 29Right-handed alpha
Helix 28
AD1
C
42 53Right-handed alpha
Helix 29
AD2
C
82 86Right-handed 310
Helix 30
AD3
C
115 128Right-handed alpha
Helix 31
AD4
C
132 148Right-handed alpha
Helix 32
AD5
C
156 171Right-handed alpha
Helix 33
AD6
C
174 188Right-handed alpha
Helix 34
AD7
C
193 200Right-handed alpha
Helix 35
AD8
C
221 226Right-handed 310
Helix 36
AD9
C
228 243Right-handed alpha
Helix 37
AE1
C
270 277Right-handed alpha
Helix 38
AE2
C
292 297Right-handed alpha
Helix 39
AE3
C
297 307Right-handed alpha
Helix 40
AE4
D
12 29Right-handed alpha
Helix 41
AE5
D
42 53Right-handed alpha
Helix 42
AE6
D
82 86Right-handed 310
Helix 43
AE7
D
115 128Right-handed alpha
Helix 44
AE8
D
132 148Right-handed alpha
Helix 45
AE9
D
156 171Right-handed alpha
Helix 46
AF1
D
174 188Right-handed alpha
Helix 47
AF2
D
193 200Right-handed alpha
Helix 48
AF3
D
221 226Right-handed 310
Helix 49
AF4
D
228 243Right-handed alpha
Helix 50
AF5
D
270 277Right-handed alpha
Helix 51
AF6
D
292 297Right-handed alpha
Helix 52
AF7
D
297 307Right-handed alpha
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There are 6 sheets in PDB entry 6LL7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 59first strand
Strand 2
A
33 37parallel
Strand 3
A
3 6parallel
Strand 4
A
67 71parallel
Strand 5
A
87 93parallel
Strand 6
A
107 110parallel
Strand 7
B
107 110anti-parallel
Strand 8
B
87 93parallel
Strand 9
B
67 71parallel
Strand 10
B
3 6parallel
Strand 11
B
33 37parallel
Strand 12
B
58 59parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 207first strand
Strand 2
A
210 219anti-parallel
Strand 3
A
247 254parallel
Strand 4
A
259 266anti-parallel
Strand 5
A
284 288anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
202 207first strand
Strand 2
B
210 219anti-parallel
Strand 3
B
247 254parallel
Strand 4
B
259 266anti-parallel
Strand 5
B
284 288anti-parallel
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There are 12 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 59first strand
Strand 2
C
33 37parallel
Strand 3
C
3 6parallel
Strand 4
C
67 71parallel
Strand 5
C
87 93parallel
Strand 6
C
107 110parallel
Strand 7
D
107 110anti-parallel
Strand 8
D
87 93parallel
Strand 9
D
67 71parallel
Strand 10
D
3 6parallel
Strand 11
D
33 37parallel
Strand 12
D
58 59parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
202 207first strand
Strand 2
C
210 219anti-parallel
Strand 3
C
247 254parallel
Strand 4
C
259 266anti-parallel
Strand 5
C
284 288anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
202 207first strand
Strand 2
D
210 219anti-parallel
Strand 3
D
247 254parallel
Strand 4
D
259 266anti-parallel
Strand 5
D
284 288anti-parallel
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