Analysis of interatomic Contacts of Structural Units in PDB entry:
6LLN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LLN entry

There is 1 chain in PDB entry 6LLN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 3GLN 257
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 10 helices in PDB entry 6LLN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 37Right-handed alpha
Helix 2
AA2
A
47 61Right-handed alpha
Helix 3
AA3
A
74 90Right-handed alpha
Helix 4
AA4
A
106 110Right-handed 310
Helix 5
AA5
A
111 123Right-handed alpha
Helix 6
AA6
A
123 137Right-handed alpha
Helix 7
AA7
A
137 142Right-handed alpha
Helix 8
AA8
A
159 181Right-handed alpha
Helix 9
AA9
A
225 238Right-handed alpha
Helix 10
AB1
A
239 242Right-handed 310
Back to top of page

There is 1 sheet (AA1) in PDB entry 6LLN.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 69first strand
Strand 2
A
40 45parallel
Strand 3
A
16 20parallel
Strand 4
A
94 97parallel
Strand 5
A
143 148parallel
Strand 6
A
185 192parallel
Strand 7
A
248 251parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il