Analysis of interatomic Contacts of Structural Units in PDB entry:
6LOL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LOL entry

There is 1 chain in PDB entry 6LOL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP -1SER 536
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6LOL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 36Right-handed alpha
Helix 2
AA2
A
42 56Right-handed alpha
Helix 3
AA3
A
197 202Right-handed 310
Helix 4
AA4
A
217 229Right-handed alpha
Helix 5
AA5
A
276 281Right-handed alpha
Helix 6
AA6
A
285 290Right-handed alpha
Helix 7
AA7
A
305 319Right-handed alpha
Helix 8
AA8
A
320 330Right-handed alpha
Helix 9
AA9
A
341 360Right-handed alpha
Helix 10
AB1
A
365 391Right-handed alpha
Helix 11
AB2
A
397 410Right-handed alpha
Helix 12
AB3
A
432 457Right-handed alpha
Helix 13
AB4
A
457 467Right-handed alpha
Helix 14
AB5
A
470 478Right-handed alpha
Helix 15
AB6
A
480 485Right-handed alpha
Helix 16
AB7
A
487 491Right-handed 310
Helix 17
AB8
A
513 527Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6LOL.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 62first strand
Strand 2
A
81 83parallel
Strand 3
A
101 103parallel
Strand 4
A
121 123parallel
Strand 5
A
141 143parallel
Strand 6
A
161 163parallel
Strand 7
A
184 187parallel
Strand 8
A
207 210parallel
Strand 9
A
237 239parallel
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