Analysis of interatomic Contacts of Structural Units in PDB entry:
6LOP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LOP entry

There are 2 chains in PDB entry 6LOP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2ARG 348
B
 LYS 2ARG 348
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 6LOP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 17Right-handed alpha
Helix 2
AA2
A
17 35Right-handed alpha
Helix 3
AA3
A
38 52Right-handed alpha
Helix 4
AA4
A
52 60Right-handed alpha
Helix 5
AA5
A
61 68Right-handed 310
Helix 6
AA6
A
69 93Right-handed alpha
Helix 7
AA7
A
98 113Right-handed alpha
Helix 8
AA8
A
133 147Right-handed alpha
Helix 9
AA9
A
151 174Right-handed alpha
Helix 10
AB1
A
175 178Right-handed 310
Helix 11
AB2
A
179 192Right-handed alpha
Helix 12
AB3
A
193 195Right-handed 310
Helix 13
AB4
A
199 208Right-handed alpha
Helix 14
AB5
A
210 220Right-handed alpha
Helix 15
AB6
A
226 238Right-handed alpha
Helix 16
AB7
A
239 253Right-handed alpha
Helix 17
AB8
A
253 260Right-handed alpha
Helix 18
AB9
A
264 269Right-handed 310
Helix 19
AC1
A
271 291Right-handed alpha
Helix 20
AC2
A
295 312Right-handed alpha
Helix 21
AC3
A
313 318Right-handed alpha
Helix 22
AC4
A
319 330Right-handed alpha
Helix 23
AC5
A
334 347Right-handed alpha
Helix 24
AC6
B
6 17Right-handed alpha
Helix 25
AC7
B
17 35Right-handed alpha
Helix 26
AC8
B
38 52Right-handed alpha
Helix 27
AC9
B
52 61Right-handed alpha
Helix 28
AD1
B
62 68Right-handed 310
Helix 29
AD2
B
69 93Right-handed alpha
Helix 30
AD3
B
98 113Right-handed alpha
Helix 31
AD4
B
133 147Right-handed alpha
Helix 32
AD5
B
151 175Right-handed alpha
Helix 33
AD6
B
176 178Right-handed 310
Helix 34
AD7
B
179 192Right-handed alpha
Helix 35
AD8
B
193 195Right-handed 310
Helix 36
AD9
B
199 207Right-handed alpha
Helix 37
AE1
B
210 220Right-handed alpha
Helix 38
AE2
B
226 238Right-handed alpha
Helix 39
AE3
B
239 253Right-handed alpha
Helix 40
AE4
B
253 260Right-handed alpha
Helix 41
AE5
B
264 269Right-handed 310
Helix 42
AE6
B
271 291Right-handed alpha
Helix 43
AE7
B
295 312Right-handed alpha
Helix 44
AE8
B
313 318Right-handed alpha
Helix 45
AE9
B
319 330Right-handed alpha
Helix 46
AF1
B
334 347Right-handed alpha
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There are no sheets in PDB entry 6LOP
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