Analysis of interatomic Contacts of Structural Units in PDB entry:
6LPH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LPH entry

There are 2 chains in PDB entry 6LPH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 13GLU 256
B
 ALA 361ALA 388
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6LPH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 29Right-handed alpha
Helix 2
AA2
A
43 47Right-handed 310
Helix 3
AA3
A
111 121Right-handed alpha
Helix 4
AA4
A
130 147Right-handed alpha
Helix 5
AA5
A
200 210Right-handed alpha
Helix 6
AA6
A
211 220Right-handed alpha
Helix 7
AA7
A
221 226Right-handed 310
Helix 8
AA8
A
239 244Right-handed alpha
Helix 9
AA9
A
245 252Right-handed 310
Helix 10
AB1
B
383 387Right-handed alpha
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There are 2 sheets in PDB entry 6LPH. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 156first strand
Strand 2
A
172 177anti-parallel
Strand 3
A
189 199anti-parallel
Strand 4
A
183 186anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 156first strand
Strand 2
A
172 177anti-parallel
Strand 3
A
189 199anti-parallel
Strand 4
A
97 109parallel
Strand 5
A
71 77anti-parallel
Strand 6
A
54 60anti-parallel
Strand 7
A
36 40anti-parallel
Strand 8
B
378 382anti-parallel
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