Analysis of interatomic Contacts of Structural Units in PDB entry:
6LQ7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LQ7 entry

There are 2 chains in PDB entry 6LQ7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 611
B
 SER 0PHE 611
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 68 helices in PDB entry 6LQ7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 18Right-handed alpha
Helix 2
AA2
A
20 24Right-handed 310
Helix 3
AA3
A
27 31Right-handed 310
Helix 4
AA4
A
34 51Right-handed alpha
Helix 5
AA5
A
53 55Right-handed 310
Helix 6
AA6
A
56 63Right-handed alpha
Helix 7
AA7
A
77 90Right-handed alpha
Helix 8
AA8
A
91 95Right-handed 310
Helix 9
AA9
A
98 102Right-handed 310
Helix 10
AB1
A
107 122Right-handed alpha
Helix 11
AB2
A
122 129Right-handed alpha
Helix 12
AB3
A
130 142Right-handed alpha
Helix 13
AB4
A
143 156Right-handed alpha
Helix 14
AB5
A
172 176Right-handed 310
Helix 15
AB6
A
223 227Right-handed 310
Helix 16
AB7
A
284 286Right-handed 310
Helix 17
AB8
A
288 326Right-handed alpha
Helix 18
AB9
A
332 335Right-handed 310
Helix 19
AC1
A
348 374Right-handed alpha
Helix 20
AC2
A
377 386Right-handed alpha
Helix 21
AC3
A
388 422Right-handed alpha
Helix 22
AC4
A
423 428Right-handed 310
Helix 23
AC5
A
432 441Right-handed alpha
Helix 24
AC6
A
442 445Right-handed 310
Helix 25
AC7
A
449 460Right-handed alpha
Helix 26
AC8
A
467 483Right-handed alpha
Helix 27
AC9
A
490 518Right-handed alpha
Helix 28
AD1
A
519 520Right-handed 310
Helix 29
AD2
A
521 523Right-handed 310
Helix 30
AD3
A
524 561Right-handed alpha
Helix 31
AD4
A
564 585Right-handed alpha
Helix 32
AD5
A
587 598Right-handed alpha
Helix 33
AD6
A
601 606Right-handed alpha
Helix 34
AD7
A
607 611Right-handed 310
Helix 35
AD8
B
7 17Right-handed alpha
Helix 36
AD9
B
20 24Right-handed 310
Helix 37
AE1
B
27 31Right-handed 310
Helix 38
AE2
B
34 51Right-handed alpha
Helix 39
AE3
B
53 55Right-handed 310
Helix 40
AE4
B
56 63Right-handed alpha
Helix 41
AE5
B
77 90Right-handed alpha
Helix 42
AE6
B
91 95Right-handed 310
Helix 43
AE7
B
98 102Right-handed 310
Helix 44
AE8
B
107 122Right-handed alpha
Helix 45
AE9
B
122 129Right-handed alpha
Helix 46
AF1
B
130 142Right-handed alpha
Helix 47
AF2
B
143 156Right-handed alpha
Helix 48
AF3
B
172 176Right-handed 310
Helix 49
AF4
B
223 227Right-handed 310
Helix 50
AF5
B
284 286Right-handed 310
Helix 51
AF6
B
288 326Right-handed alpha
Helix 52
AF7
B
332 335Right-handed 310
Helix 53
AF8
B
348 375Right-handed alpha
Helix 54
AF9
B
377 386Right-handed alpha
Helix 55
AG1
B
388 422Right-handed alpha
Helix 56
AG2
B
423 428Right-handed 310
Helix 57
AG3
B
432 442Right-handed alpha
Helix 58
AG4
B
443 445Right-handed 310
Helix 59
AG5
B
449 460Right-handed alpha
Helix 60
AG6
B
467 483Right-handed alpha
Helix 61
AG7
B
490 518Right-handed alpha
Helix 62
AG8
B
519 520Right-handed 310
Helix 63
AG9
B
521 523Right-handed 310
Helix 64
AH1
B
524 562Right-handed alpha
Helix 65
AH2
B
564 585Right-handed alpha
Helix 66
AH3
B
587 598Right-handed alpha
Helix 67
AH4
B
601 606Right-handed alpha
Helix 68
AH5
B
607 611Right-handed 310
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There are 10 sheets in PDB entry 6LQ7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 67first strand
Strand 2
A
74 75anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 163first strand
Strand 2
A
209 217parallel
Strand 3
A
179 182parallel
Strand 4
A
188 198anti-parallel
Strand 5
A
266 271anti-parallel
Strand 6
A
250 255anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 163first strand
Strand 2
A
209 217parallel
Strand 3
A
228 233anti-parallel
Strand 4
A
278 282anti-parallel
Strand 5
A
188 198anti-parallel
Strand 6
A
266 271anti-parallel
Strand 7
A
250 255anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
235 237first strand
Strand 2
A
244 247anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
327 330first strand
Strand 2
A
342 344anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 68first strand
Strand 2
B
73 75anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 163first strand
Strand 2
B
209 217parallel
Strand 3
B
179 182parallel
Strand 4
B
188 198anti-parallel
Strand 5
B
266 271anti-parallel
Strand 6
B
250 255anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 163first strand
Strand 2
B
209 217parallel
Strand 3
B
228 233anti-parallel
Strand 4
B
278 282anti-parallel
Strand 5
B
188 198anti-parallel
Strand 6
B
266 271anti-parallel
Strand 7
B
250 255anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
235 237first strand
Strand 2
B
244 247anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
327 330first strand
Strand 2
B
342 344anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il