Analysis of interatomic Contacts of Structural Units in PDB entry:
6LQI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6LQI entry

There are 3 chains in PDB entry 6LQI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 576	GLU 2523
B	GLU 576	GLU 2523
C	GLU 576	GLU 2523

There are162 helices in PDB entry 6LQI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	577	585	Right-handed alpha
Helix 2	AA2	A	586	596	Right-handed alpha
Helix 3	AA3	A	604	625	Right-handed alpha
Helix 4	AA4	A	631	650	Right-handed alpha
Helix 5	AA5	A	692	709	Right-handed alpha
Helix 6	AA6	A	710	716	Right-handed alpha
Helix 7	AA7	A	785	804	Right-handed alpha
Helix 8	AA8	A	804	821	Right-handed alpha
Helix 9	AA9	A	828	840	Right-handed alpha
Helix 10	AB1	A	845	866	Right-handed alpha
Helix 11	AB2	A	924	950	Right-handed alpha
Helix 12	AB3	A	973	984	Right-handed alpha
Helix 13	AB4	A	989	1006	Right-handed alpha
Helix 14	AB5	A	1007	1023	Right-handed alpha
Helix 15	AB6	A	1027	1053	Right-handed alpha
Helix 16	AB7	A	1092	1111	Right-handed alpha
Helix 17	AB8	A	1140	1145	Right-handed 310
Helix 18	AB9	A	1148	1159	Right-handed alpha
Helix 19	AC1	A	1159	1175	Right-handed alpha
Helix 20	AC2	A	1181	1200	Right-handed alpha
Helix 21	AC3	A	1202	1224	Right-handed alpha
Helix 22	AC4	A	1280	1299	Right-handed alpha
Helix 23	AC5	A	1302	1315	Right-handed alpha
Helix 24	AC6	A	1315	1365	Right-handed alpha
Helix 25	AC7	A	1387	1391	Right-handed 310
Helix 26	AC8	A	1481	1521	Right-handed alpha
Helix 27	AC9	A	1632	1645	Right-handed alpha
Helix 28	AD1	A	1647	1662	Right-handed alpha
Helix 29	AD2	A	1663	1677	Right-handed alpha
Helix 30	AD3	A	1681	1683	Right-handed 310
Helix 31	AD4	A	1684	1695	Right-handed alpha
Helix 32	AD5	A	1704	1720	Right-handed alpha
Helix 33	AD6	A	1756	1777	Right-handed alpha
Helix 34	AD7	A	1934	1942	Right-handed alpha
Helix 35	AD8	A	1952	1970	Right-handed alpha
Helix 36	AD9	A	1991	2016	Right-handed alpha
Helix 37	AE1	A	2019	2037	Right-handed alpha
Helix 38	AE2	A	2049	2076	Right-handed alpha
Helix 39	AE3	A	2091	2102	Right-handed alpha
Helix 40	AE4	A	2107	2119	Right-handed alpha
Helix 41	AE5	A	2124	2150	Right-handed alpha
Helix 42	AE6	A	2160	2181	Right-handed alpha
Helix 43	AE7	A	2181	2188	Right-handed alpha
Helix 44	AE8	A	2228	2238	Right-handed alpha
Helix 45	AE9	A	2242	2252	Right-handed alpha
Helix 46	AF1	A	2253	2255	Right-handed 310
Helix 47	AF2	A	2273	2287	Right-handed alpha
Helix 48	AF3	A	2324	2334	Right-handed alpha
Helix 49	AF4	A	2397	2401	Right-handed alpha
Helix 50	AF5	A	2442	2458	Right-handed alpha
Helix 51	AF6	A	2467	2472	Right-handed alpha
Helix 52	AF7	A	2476	2493	Right-handed alpha
Helix 53	AF8	A	2494	2511	Right-handed alpha
Helix 54	AF9	A	2512	2517	Right-handed alpha
Helix 55	AG1	B	577	585	Right-handed alpha
Helix 56	AG2	B	586	596	Right-handed alpha
Helix 57	AG3	B	604	625	Right-handed alpha
Helix 58	AG4	B	631	650	Right-handed alpha
Helix 59	AG5	B	692	709	Right-handed alpha
Helix 60	AG6	B	710	716	Right-handed alpha
Helix 61	AG7	B	785	804	Right-handed alpha
Helix 62	AG8	B	804	821	Right-handed alpha
Helix 63	AG9	B	828	840	Right-handed alpha
Helix 64	AH1	B	845	866	Right-handed alpha
Helix 65	AH2	B	924	950	Right-handed alpha
Helix 66	AH3	B	973	984	Right-handed alpha
Helix 67	AH4	B	989	1006	Right-handed alpha
Helix 68	AH5	B	1007	1023	Right-handed alpha
Helix 69	AH6	B	1027	1053	Right-handed alpha
Helix 70	AH7	B	1092	1111	Right-handed alpha
Helix 71	AH8	B	1140	1145	Right-handed 310
Helix 72	AH9	B	1148	1159	Right-handed alpha
Helix 73	AI1	B	1159	1175	Right-handed alpha
Helix 74	AI2	B	1181	1200	Right-handed alpha
Helix 75	AI3	B	1202	1224	Right-handed alpha
Helix 76	AI4	B	1280	1299	Right-handed alpha
Helix 77	AI5	B	1302	1315	Right-handed alpha
Helix 78	AI6	B	1315	1365	Right-handed alpha
Helix 79	AI7	B	1387	1391	Right-handed 310
Helix 80	AI8	B	1481	1521	Right-handed alpha
Helix 81	AI9	B	1632	1645	Right-handed alpha
Helix 82	AJ1	B	1647	1662	Right-handed alpha
Helix 83	AJ2	B	1663	1677	Right-handed alpha
Helix 84	AJ3	B	1681	1683	Right-handed 310
Helix 85	AJ4	B	1684	1695	Right-handed alpha
Helix 86	AJ5	B	1704	1720	Right-handed alpha
Helix 87	AJ6	B	1756	1777	Right-handed alpha
Helix 88	AJ7	B	1934	1942	Right-handed alpha
Helix 89	AJ8	B	1952	1970	Right-handed alpha
Helix 90	AJ9	B	1991	2016	Right-handed alpha
Helix 91	AK1	B	2019	2037	Right-handed alpha
Helix 92	AK2	B	2049	2076	Right-handed alpha
Helix 93	AK3	B	2091	2102	Right-handed alpha
Helix 94	AK4	B	2107	2119	Right-handed alpha
Helix 95	AK5	B	2124	2150	Right-handed alpha
Helix 96	AK6	B	2160	2181	Right-handed alpha
Helix 97	AK7	B	2181	2188	Right-handed alpha
Helix 98	AK8	B	2228	2238	Right-handed alpha
Helix 99	AK9	B	2242	2252	Right-handed alpha
Helix 100	AL1	B	2253	2255	Right-handed 310
Helix 101	AL2	B	2273	2287	Right-handed alpha
Helix 102	AL3	B	2324	2334	Right-handed alpha
Helix 103	AL4	B	2397	2401	Right-handed alpha
Helix 104	AL5	B	2442	2458	Right-handed alpha
Helix 105	AL6	B	2467	2472	Right-handed alpha
Helix 106	AL7	B	2476	2493	Right-handed alpha
Helix 107	AL8	B	2494	2511	Right-handed alpha
Helix 108	AL9	B	2512	2517	Right-handed alpha
Helix 109	AM1	C	577	585	Right-handed alpha
Helix 110	AM2	C	586	596	Right-handed alpha
Helix 111	AM3	C	604	625	Right-handed alpha
Helix 112	AM4	C	631	650	Right-handed alpha
Helix 113	AM5	C	692	709	Right-handed alpha
Helix 114	AM6	C	710	716	Right-handed alpha
Helix 115	AM7	C	785	804	Right-handed alpha
Helix 116	AM8	C	804	821	Right-handed alpha
Helix 117	AM9	C	828	840	Right-handed alpha
Helix 118	AN1	C	844	866	Right-handed alpha
Helix 119	AN2	C	924	950	Right-handed alpha
Helix 120	AN3	C	973	984	Right-handed alpha
Helix 121	AN4	C	989	1006	Right-handed alpha
Helix 122	AN5	C	1007	1023	Right-handed alpha
Helix 123	AN6	C	1027	1053	Right-handed alpha
Helix 124	AN7	C	1092	1111	Right-handed alpha
Helix 125	AN8	C	1140	1145	Right-handed 310
Helix 126	AN9	C	1148	1159	Right-handed alpha
Helix 127	AO1	C	1159	1175	Right-handed alpha
Helix 128	AO2	C	1181	1200	Right-handed alpha
Helix 129	AO3	C	1202	1224	Right-handed alpha
Helix 130	AO4	C	1280	1299	Right-handed alpha
Helix 131	AO5	C	1302	1315	Right-handed alpha
Helix 132	AO6	C	1315	1365	Right-handed alpha
Helix 133	AO7	C	1387	1391	Right-handed 310
Helix 134	AO8	C	1481	1521	Right-handed alpha
Helix 135	AO9	C	1632	1645	Right-handed alpha
Helix 136	AP1	C	1647	1662	Right-handed alpha
Helix 137	AP2	C	1663	1677	Right-handed alpha
Helix 138	AP3	C	1681	1683	Right-handed 310
Helix 139	AP4	C	1684	1695	Right-handed alpha
Helix 140	AP5	C	1704	1720	Right-handed alpha
Helix 141	AP6	C	1756	1777	Right-handed alpha
Helix 142	AP7	C	1934	1942	Right-handed alpha
Helix 143	AP8	C	1952	1970	Right-handed alpha
Helix 144	AP9	C	1991	2016	Right-handed alpha
Helix 145	AQ1	C	2019	2037	Right-handed alpha
Helix 146	AQ2	C	2049	2076	Right-handed alpha
Helix 147	AQ3	C	2091	2102	Right-handed alpha
Helix 148	AQ4	C	2107	2119	Right-handed alpha
Helix 149	AQ5	C	2124	2150	Right-handed alpha
Helix 150	AQ6	C	2160	2181	Right-handed alpha
Helix 151	AQ7	C	2181	2188	Right-handed alpha
Helix 152	AQ8	C	2228	2238	Right-handed alpha
Helix 153	AQ9	C	2242	2252	Right-handed alpha
Helix 154	AR1	C	2253	2255	Right-handed 310
Helix 155	AR2	C	2273	2287	Right-handed alpha
Helix 156	AR3	C	2324	2334	Right-handed alpha
Helix 157	AR4	C	2397	2401	Right-handed alpha
Helix 158	AR5	C	2442	2458	Right-handed alpha
Helix 159	AR6	C	2467	2472	Right-handed alpha
Helix 160	AR7	C	2476	2493	Right-handed alpha
Helix 161	AR8	C	2494	2511	Right-handed alpha
Helix 162	AR9	C	2512	2517	Right-handed alpha

There are 11 sheets in PDB entry 6LQI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2215	2220	first strand
Strand 2	A	2201	2208	anti-parallel
Strand 3	A	2291	2300	anti-parallel
Strand 4	A	2311	2314	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2215	2220	first strand
Strand 2	A	2201	2208	anti-parallel
Strand 3	A	2291	2300	anti-parallel
Strand 4	A	2317	2320	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2224	2226	first strand
Strand 2	A	2257	2263	anti-parallel
Strand 3	A	2419	2426	anti-parallel
Strand 4	A	2351	2354	parallel
Strand 5	A	2361	2362	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2377	2385	first strand
Strand 2	A	2402	2410	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2215	2220	first strand
Strand 2	B	2201	2208	anti-parallel
Strand 3	B	2291	2300	anti-parallel
Strand 4	B	2311	2314	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2215	2220	first strand
Strand 2	B	2201	2208	anti-parallel
Strand 3	B	2291	2300	anti-parallel
Strand 4	B	2317	2320	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2224	2226	first strand
Strand 2	B	2257	2263	anti-parallel
Strand 3	B	2419	2426	anti-parallel
Strand 4	B	2351	2354	parallel
Strand 5	B	2361	2362	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2377	2385	first strand
Strand 2	B	2402	2410	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2215	2220	first strand
Strand 2	C	2201	2208	anti-parallel
Strand 3	C	2291	2300	anti-parallel
Strand 4	C	2311	2320	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2224	2226	first strand
Strand 2	C	2257	2263	anti-parallel
Strand 3	C	2419	2426	anti-parallel
Strand 4	C	2351	2354	parallel
Strand 5	C	2361	2362	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2377	2385	first strand
Strand 2	C	2402	2410	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6LQI

Analysis of interatomic Contacts of Structural Units in PDB entry:
6LQI