Analysis of interatomic Contacts of Structural Units in PDB entry:
6LSU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LSU entry

There is 1 chain in PDB entry 6LSU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 5PRO 719
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 6LSU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 18Right-handed alpha
Helix 2
AA2
A
18 30Right-handed alpha
Helix 3
AA3
A
32 50Right-handed alpha
Helix 4
AA4
A
50 69Right-handed alpha
Helix 5
AA5
A
72 87Right-handed alpha
Helix 6
AA6
A
97 108Right-handed alpha
Helix 7
AA7
A
126 139Right-handed alpha
Helix 8
AA8
A
139 150Right-handed alpha
Helix 9
AA9
A
154 170Right-handed alpha
Helix 10
AB1
A
172 183Right-handed alpha
Helix 11
AB2
A
185 194Right-handed alpha
Helix 12
AB3
A
198 214Right-handed alpha
Helix 13
AB4
A
216 225Right-handed alpha
Helix 14
AB5
A
227 240Right-handed alpha
Helix 15
AB6
A
241 244Right-handed 310
Helix 16
AB7
A
245 260Right-handed alpha
Helix 17
AB8
A
262 272Right-handed alpha
Helix 18
AB9
A
274 283Right-handed alpha
Helix 19
AC1
A
295 313Right-handed alpha
Helix 20
AC2
A
319 329Right-handed alpha
Helix 21
AC3
A
331 342Right-handed alpha
Helix 22
AC4
A
348 362Right-handed alpha
Helix 23
AC5
A
364 372Right-handed alpha
Helix 24
AC6
A
399 410Right-handed alpha
Helix 25
AC7
A
415 431Right-handed alpha
Helix 26
AC8
A
433 453Right-handed alpha
Helix 27
AC9
A
493 500Right-handed alpha
Helix 28
AD1
A
504 507Right-handed 310
Helix 29
AD2
A
508 524Right-handed alpha
Helix 30
AD3
A
529 539Right-handed alpha
Helix 31
AD4
A
554 564Right-handed alpha
Helix 32
AD5
A
571 586Right-handed alpha
Helix 33
AD6
A
588 597Right-handed alpha
Helix 34
AD7
A
598 610Right-handed alpha
Helix 35
AD8
A
616 633Right-handed alpha
Helix 36
AD9
A
641 654Right-handed alpha
Helix 37
AE1
A
654 669Right-handed alpha
Helix 38
AE2
A
670 673Right-handed 310
Helix 39
AE3
A
697 707Right-handed alpha
Helix 40
AE4
A
707 713Right-handed alpha
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There are 2 sheets in PDB entry 6LSU. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
375 379first strand
Strand 2
A
394 398anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
541 542first strand
Strand 2
A
552 553anti-parallel
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