Analysis of interatomic Contacts of Structural Units in PDB entry:
6LTA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LTA entry

There is 1 chain in PDB entry 6LTA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 24LEU 1098
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6LTA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 37Right-handed 310
Helix 2
AA2
A
44 55Right-handed alpha
Helix 3
AA3
A
77 92Right-handed alpha
Helix 4
AA4
A
93 95Right-handed 310
Helix 5
AA5
A
126 133Right-handed alpha
Helix 6
AA6
A
174 181Right-handed alpha
Helix 7
AA7
A
181 192Right-handed alpha
Helix 8
AA8
A
203 214Right-handed alpha
Helix 9
AA9
A
218 233Right-handed alpha
Helix 10
AB1
A
262 276Right-handed alpha
Helix 11
AB2
A
279 293Right-handed alpha
Helix 12
AB3
A
315 319Right-handed 310
Helix 13
AB4
A
337 354Right-handed alpha
Helix 14
AB5
A
359 372Right-handed alpha
Helix 15
AB6
A
372 377Right-handed alpha
Helix 16
AB7
A
394 398Right-handed 310
Helix 17
AB8
A
438 457Right-handed alpha
Helix 18
AB9
A
461 466Right-handed 310
Helix 19
AC1
A
473 484Right-handed alpha
Helix 20
AC2
A
494 506Right-handed alpha
Helix 21
AC3
A
521 538Right-handed alpha
Helix 22
AC4
A
553 567Right-handed alpha
Helix 23
AC5
A
580 590Right-handed alpha
Helix 24
AC6
A
597 604Right-handed 310
Helix 25
AC7
A
656 671Right-handed alpha
Helix 26
AC8
A
688 699Right-handed alpha
Helix 27
AC9
A
713 724Right-handed alpha
Helix 28
AD1
A
732 745Right-handed alpha
Helix 29
AD2
A
767 776Right-handed alpha
Helix 30
AD3
A
787 791Right-handed 310
Helix 31
AD4
A
853 860Right-handed alpha
Helix 32
AD5
A
1012 1029Right-handed alpha
Helix 33
AD6
A
1045 1061Right-handed alpha
Helix 34
AD7
A
1065 1071Right-handed alpha
Helix 35
AD8
A
1074 1084Right-handed alpha
Helix 36
AD9
A
1088 1097Right-handed alpha
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There are 9 sheets in PDB entry 6LTA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 42first strand
Strand 2
A
104 107anti-parallel
Strand 3
A
97 99anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 120first strand
Strand 2
A
151 158parallel
Strand 3
A
161 169anti-parallel
Strand 4
A
66 73anti-parallel
Strand 5
A
400 407anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 261first strand
Strand 2
A
423 431anti-parallel
Strand 3
A
413 420anti-parallel
Strand 4
A
380 384parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 308first strand
Strand 2
A
324 331anti-parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
518 520first strand
Strand 2
A
510 514anti-parallel
Strand 3
A
702 705parallel
Strand 4
A
677 679parallel
Strand 5
A
728 731parallel
Strand 6
A
756 759parallel
Strand 7
A
780 785parallel
Strand 8
A
795 799anti-parallel
Strand 9
A
813 814anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
569 572first strand
Strand 2
A
545 548parallel
Strand 3
A
593 596parallel
Strand 4
A
611 614parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
636 642first strand
Strand 2
A
650 655anti-parallel
Strand 3
A
849 850anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
819 823first strand
Strand 2
A
836 841anti-parallel
Strand 3
A
870 880anti-parallel
Strand 4
A
861 863anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
819 823first strand
Strand 2
A
836 841anti-parallel
Strand 3
A
870 880anti-parallel
Strand 4
A
886 890anti-parallel
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