Analysis of interatomic Contacts of Structural Units in PDB entry:
6LTF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LTF entry

There is 1 chain in PDB entry 6LTF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2LEU 335
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6LTF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 29Right-handed alpha
Helix 2
AA2
A
40 48Right-handed alpha
Helix 3
AA3
A
52 63Right-handed alpha
Helix 4
AA4
A
80 90Right-handed alpha
Helix 5
AA5
A
122 126Right-handed 310
Helix 6
AA6
A
146 165Right-handed alpha
Helix 7
AA7
A
180 194Right-handed alpha
Helix 8
AA8
A
206 216Right-handed alpha
Helix 9
AA9
A
217 220Right-handed 310
Helix 10
AB1
A
226 241Right-handed alpha
Helix 11
AB2
A
242 246Right-handed 310
Helix 12
AB3
A
266 270Right-handed 310
Helix 13
AB4
A
277 292Right-handed alpha
Helix 14
AB5
A
293 311Right-handed alpha
Helix 15
AB6
A
315 319Right-handed 310
Helix 16
AB7
A
323 333Right-handed alpha
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There are 2 sheets in PDB entry 6LTF. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 37first strand
Strand 2
A
3 8parallel
Strand 3
A
64 67parallel
Strand 4
A
257 261parallel
Strand 5
A
248 252anti-parallel
Strand 6
A
93 99anti-parallel
Strand 7
A
113 119anti-parallel
Strand 8
A
222 225parallel
Strand 9
A
168 173parallel
Strand 10
A
200 205parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 132first strand
Strand 2
A
139 140anti-parallel
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