Analysis of interatomic Contacts of Structural Units in PDB entry:
6LU1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LU1 entry

There are 10 chains in PDB entry 6LU1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 11GLY 755
B
 ALA 1PHE 739
C
 ALA 1TYR 80
D
 THR 1PRO 138
E
 VAL 1ALA 69
F
 ARG 59ALA 87
I
 MET 1ALA 38
J
 GLY 24ARG 31
L
 LEU 4LEU 138
M
 MET 1LYS 31
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 89 helices in PDB entry 6LU1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 30Right-handed 310
Helix 2
AA2
A
36 41Right-handed 310
Helix 3
AA3
A
45 54Right-handed alpha
Helix 4
AA4
A
57 61Right-handed 310
Helix 5
AA5
A
66 96Right-handed alpha
Helix 6
AA6
A
99 104Right-handed alpha
Helix 7
AA7
A
122 127Right-handed 310
Helix 8
AA8
A
142 150Right-handed alpha
Helix 9
AA9
A
158 179Right-handed alpha
Helix 10
AB1
A
186 191Right-handed alpha
Helix 11
AB2
A
193 202Right-handed alpha
Helix 12
AB3
A
206 211Right-handed alpha
Helix 13
AB4
A
211 219Right-handed alpha
Helix 14
AB5
A
219 230Right-handed alpha
Helix 15
AB6
A
240 245Right-handed alpha
Helix 16
AB7
A
264 269Right-handed alpha
Helix 17
AB8
A
271 276Right-handed 310
Helix 18
AB9
A
293 312Right-handed alpha
Helix 19
AC1
A
324 330Right-handed alpha
Helix 20
AC2
A
344 349Right-handed alpha
Helix 21
AC3
A
357 362Right-handed alpha
Helix 22
AC4
A
363 374Right-handed alpha
Helix 23
AC5
A
386 419Right-handed alpha
Helix 24
AC6
A
428 435Right-handed alpha
Helix 25
AC7
A
437 468Right-handed alpha
Helix 26
AC8
A
484 494Right-handed alpha
Helix 27
AC9
A
510 514Right-handed 310
Helix 28
AD1
A
532 559Right-handed alpha
Helix 29
AD2
A
568 573Right-handed alpha
Helix 30
AD3
A
591 621Right-handed alpha
Helix 31
AD4
A
638 643Right-handed alpha
Helix 32
AD5
A
646 652Right-handed alpha
Helix 33
AD6
A
658 663Right-handed alpha
Helix 34
AD7
A
669 686Right-handed alpha
Helix 35
AD8
A
686 692Right-handed alpha
Helix 36
AD9
A
693 710Right-handed alpha
Helix 37
AE1
A
723 755Right-handed alpha
Helix 38
AE2
B
8 13Right-handed alpha
Helix 39
AE3
B
17 23Right-handed alpha
Helix 40
AE4
B
29 33Right-handed 310
Helix 41
AE5
B
37 45Right-handed alpha
Helix 42
AE6
B
48 71Right-handed alpha
Helix 43
AE7
B
118 126Right-handed alpha
Helix 44
AE8
B
131 145Right-handed alpha
Helix 45
AE9
B
147 155Right-handed alpha
Helix 46
AF1
B
163 168Right-handed alpha
Helix 47
AF2
B
170 179Right-handed alpha
Helix 48
AF3
B
183 191Right-handed alpha
Helix 49
AF4
B
191 196Right-handed alpha
Helix 50
AF5
B
196 201Right-handed alpha
Helix 51
AF6
B
221 227Right-handed alpha
Helix 52
AF7
B
228 234Right-handed 310
Helix 53
AF8
B
270 285Right-handed alpha
Helix 54
AF9
B
332 345Right-handed alpha
Helix 55
AG1
B
348 356Right-handed alpha
Helix 56
AG2
B
367 400Right-handed alpha
Helix 57
AG3
B
409 415Right-handed alpha
Helix 58
AG4
B
417 448Right-handed alpha
Helix 59
AG5
B
462 468Right-handed alpha
Helix 60
AG6
B
486 491Right-handed alpha
Helix 61
AG7
B
500 508Right-handed alpha
Helix 62
AG8
B
519 546Right-handed alpha
Helix 63
AG9
B
578 583Right-handed alpha
Helix 64
AH1
B
586 608Right-handed alpha
Helix 65
AH2
B
612 619Right-handed alpha
Helix 66
AH3
B
621 628Right-handed alpha
Helix 67
AH4
B
629 634Right-handed alpha
Helix 68
AH5
B
649 672Right-handed alpha
Helix 69
AH6
B
673 690Right-handed alpha
Helix 70
AH7
B
707 737Right-handed alpha
Helix 71
AH8
C
43 47Right-handed 310
Helix 72
AH9
C
51 56Right-handed alpha
Helix 73
AI1
C
72 77Right-handed alpha
Helix 74
AI2
D
60 71Right-handed alpha
Helix 75
AI3
D
118 122Right-handed 310
Helix 76
AI4
F
65 81Right-handed alpha
Helix 77
AI5
F
82 87Right-handed alpha
Helix 78
AI6
I
10 19Right-handed alpha
Helix 79
AI7
I
21 35Right-handed alpha
Helix 80
AI8
J
27 31Right-handed 310
Helix 81
AI9
L
9 11Right-handed 310
Helix 82
AJ1
L
24 32Right-handed alpha
Helix 83
AJ2
L
42 55Right-handed alpha
Helix 84
AJ3
L
59 64Right-handed alpha
Helix 85
AJ4
L
75 101Right-handed alpha
Helix 86
AJ5
L
115 135Right-handed alpha
Helix 87
AJ6
M
4 15Right-handed alpha
Helix 88
AJ7
M
17 22Right-handed alpha
Helix 89
AJ8
M
22 30Right-handed alpha
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There are 9 sheets in PDB entry 6LU1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 114first strand
Strand 2
A
135 138anti-parallel
Strand 3
A
128 129anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
518 520first strand
Strand 2
A
523 526anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
623 625first strand
Strand 2
A
631 633anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
64 67first strand
Strand 2
C
3 7anti-parallel
Strand 3
D
114 115parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
26 29first strand
Strand 2
C
37 40anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
53 58first strand
Strand 2
D
26 32anti-parallel
Strand 3
D
81 86anti-parallel
Strand 4
D
90 91anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
37 41first strand
Strand 2
D
45 49anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
57 60first strand
Strand 2
E
36 39anti-parallel
Strand 3
E
20 25anti-parallel
Strand 4
E
6 9anti-parallel
Strand 5
E
65 66anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
6 7first strand
Strand 2
L
17 18anti-parallel
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