Analysis of interatomic Contacts of Structural Units in PDB entry:
6LU2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LU2 entry

There is 1 chain in PDB entry 6LU2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 35LYS 515
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 23 helices in PDB entry 6LU2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 53Right-handed 310
Helix 2
AA2
A
55 66Right-handed alpha
Helix 3
AA3
A
109 124Right-handed alpha
Helix 4
AA4
A
125 134Right-handed alpha
Helix 5
AA5
A
159 164Right-handed alpha
Helix 6
AA6
A
165 170Right-handed 310
Helix 7
AA7
A
173 178Right-handed alpha
Helix 8
AA8
A
179 184Right-handed alpha
Helix 9
AA9
A
240 250Right-handed alpha
Helix 10
AB1
A
259 266Right-handed 310
Helix 11
AB2
A
267 269Right-handed 310
Helix 12
AB3
A
289 292Right-handed 310
Helix 13
AB4
A
293 304Right-handed alpha
Helix 14
AB5
A
305 315Right-handed alpha
Helix 15
AB6
A
344 353Right-handed alpha
Helix 16
AB7
A
366 368Right-handed 310
Helix 17
AB8
A
369 382Right-handed alpha
Helix 18
AB9
A
392 403Right-handed alpha
Helix 19
AC1
A
404 407Right-handed 310
Helix 20
AC2
A
421 427Right-handed alpha
Helix 21
AC3
A
432 436Right-handed 310
Helix 22
AC4
A
445 457Right-handed alpha
Helix 23
AC5
A
460 478Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 6LU2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 42first strand
Strand 2
A
232 237parallel
Strand 3
A
206 211anti-parallel
Strand 4
A
196 202anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 73first strand
Strand 2
A
76 79anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 88first strand
Strand 2
A
91 96anti-parallel
Strand 3
A
148 152anti-parallel
Strand 4
A
139 143anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
255 258first strand
Strand 2
A
483 493anti-parallel
Strand 3
A
319 320anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
255 258first strand
Strand 2
A
483 493anti-parallel
Strand 3
A
271 283anti-parallel
Strand 4
A
409 414anti-parallel
Strand 5
A
356 362parallel
Strand 6
A
385 391parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
497 500first strand
Strand 2
A
510 513anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il