Analysis of interatomic Contacts of Structural Units in PDB entry:
6LU9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6LU9 entry

There are 4 chains in PDB entry 6LU9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 1	PRO 783
B	ASP 1	PRO 783
C	ASP 1	PRO 783
D	ASP 1	PRO 783

There are103 helices in PDB entry 6LU9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	30	Right-handed alpha
Helix 2	AA2	A	51	66	Right-handed alpha
Helix 3	AA3	A	75	90	Right-handed alpha
Helix 4	AA4	A	128	140	Right-handed alpha
Helix 5	AA5	A	154	157	Right-handed 310
Helix 6	AA6	A	158	168	Right-handed alpha
Helix 7	AA7	A	180	192	Right-handed alpha
Helix 8	AA8	A	193	204	Right-handed alpha
Helix 9	AA9	A	212	226	Right-handed alpha
Helix 10	AB1	A	243	254	Right-handed alpha
Helix 11	AB2	A	270	275	Right-handed alpha
Helix 12	AB3	A	283	288	Right-handed alpha
Helix 13	AB4	A	291	296	Right-handed alpha
Helix 14	AB5	A	298	320	Right-handed alpha
Helix 15	AB6	A	342	352	Right-handed alpha
Helix 16	AB7	A	446	459	Right-handed alpha
Helix 17	AB8	A	483	491	Right-handed alpha
Helix 18	AB9	A	504	509	Right-handed alpha
Helix 19	AC1	A	644	650	Right-handed alpha
Helix 20	AC2	A	662	673	Right-handed alpha
Helix 21	AC3	A	679	690	Right-handed alpha
Helix 22	AC4	A	701	712	Right-handed alpha
Helix 23	AC5	A	720	730	Right-handed alpha
Helix 24	AC6	A	757	771	Right-handed alpha
Helix 25	AC7	A	772	782	Right-handed alpha
Helix 26	AC8	B	14	30	Right-handed alpha
Helix 27	AC9	B	51	66	Right-handed alpha
Helix 28	AD1	B	75	90	Right-handed alpha
Helix 29	AD2	B	128	140	Right-handed alpha
Helix 30	AD3	B	154	157	Right-handed 310
Helix 31	AD4	B	158	168	Right-handed alpha
Helix 32	AD5	B	180	192	Right-handed alpha
Helix 33	AD6	B	193	204	Right-handed alpha
Helix 34	AD7	B	212	226	Right-handed alpha
Helix 35	AD8	B	243	254	Right-handed alpha
Helix 36	AD9	B	270	275	Right-handed alpha
Helix 37	AE1	B	283	288	Right-handed alpha
Helix 38	AE2	B	291	296	Right-handed alpha
Helix 39	AE3	B	298	321	Right-handed alpha
Helix 40	AE4	B	342	352	Right-handed alpha
Helix 41	AE5	B	446	460	Right-handed alpha
Helix 42	AE6	B	483	491	Right-handed alpha
Helix 43	AE7	B	506	509	Right-handed 310
Helix 44	AE8	B	644	649	Right-handed alpha
Helix 45	AE9	B	662	673	Right-handed alpha
Helix 46	AF1	B	679	690	Right-handed alpha
Helix 47	AF2	B	691	695	Right-handed 310
Helix 48	AF3	B	701	712	Right-handed alpha
Helix 49	AF4	B	720	728	Right-handed alpha
Helix 50	AF5	B	757	771	Right-handed alpha
Helix 51	AF6	B	773	782	Right-handed alpha
Helix 52	AF7	C	14	31	Right-handed alpha
Helix 53	AF8	C	51	66	Right-handed alpha
Helix 54	AF9	C	78	90	Right-handed alpha
Helix 55	AG1	C	99	103	Right-handed 310
Helix 56	AG2	C	128	140	Right-handed alpha
Helix 57	AG3	C	154	157	Right-handed 310
Helix 58	AG4	C	158	168	Right-handed alpha
Helix 59	AG5	C	180	192	Right-handed alpha
Helix 60	AG6	C	193	204	Right-handed alpha
Helix 61	AG7	C	212	226	Right-handed alpha
Helix 62	AG8	C	243	254	Right-handed alpha
Helix 63	AG9	C	291	296	Right-handed alpha
Helix 64	AH1	C	298	321	Right-handed alpha
Helix 65	AH2	C	341	352	Right-handed alpha
Helix 66	AH3	C	446	460	Right-handed alpha
Helix 67	AH4	C	483	491	Right-handed alpha
Helix 68	AH5	C	504	509	Right-handed alpha
Helix 69	AH6	C	644	651	Right-handed alpha
Helix 70	AH7	C	662	672	Right-handed alpha
Helix 71	AH8	C	679	690	Right-handed alpha
Helix 72	AH9	C	701	712	Right-handed alpha
Helix 73	AI1	C	719	730	Right-handed alpha
Helix 74	AI2	C	757	771	Right-handed alpha
Helix 75	AI3	C	773	782	Right-handed alpha
Helix 76	AI4	D	14	30	Right-handed alpha
Helix 77	AI5	D	51	66	Right-handed alpha
Helix 78	AI6	D	75	90	Right-handed alpha
Helix 79	AI7	D	99	103	Right-handed 310
Helix 80	AI8	D	128	140	Right-handed alpha
Helix 81	AI9	D	154	157	Right-handed 310
Helix 82	AJ1	D	158	168	Right-handed alpha
Helix 83	AJ2	D	180	192	Right-handed alpha
Helix 84	AJ3	D	193	204	Right-handed alpha
Helix 85	AJ4	D	212	226	Right-handed alpha
Helix 86	AJ5	D	243	254	Right-handed alpha
Helix 87	AJ6	D	270	275	Right-handed alpha
Helix 88	AJ7	D	291	296	Right-handed alpha
Helix 89	AJ8	D	298	321	Right-handed alpha
Helix 90	AJ9	D	340	352	Right-handed alpha
Helix 91	AK1	D	446	460	Right-handed alpha
Helix 92	AK2	D	477	481	Right-handed 310
Helix 93	AK3	D	483	491	Right-handed alpha
Helix 94	AK4	D	504	511	Right-handed alpha
Helix 95	AK5	D	644	649	Right-handed alpha
Helix 96	AK6	D	662	672	Right-handed alpha
Helix 97	AK7	D	674	678	Right-handed 310
Helix 98	AK8	D	679	690	Right-handed alpha
Helix 99	AK9	D	691	695	Right-handed 310
Helix 100	AL1	D	701	712	Right-handed alpha
Helix 101	AL2	D	719	729	Right-handed alpha
Helix 102	AL3	D	757	771	Right-handed alpha
Helix 103	AL4	D	773	782	Right-handed alpha

There are 28 sheets in PDB entry 6LU9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	40	47	first strand
Strand 2	A	4	11	parallel
Strand 3	A	70	74	parallel
Strand 4	A	93	97	parallel
Strand 5	A	120	122	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	171	176	first strand
Strand 2	A	144	149	parallel
Strand 3	A	206	210	parallel
Strand 4	A	234	238	parallel
Strand 5	A	257	264	parallel
Strand 6	A	374	383	anti-parallel
Strand 7	A	387	397	anti-parallel
Strand 8	A	401	403	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	276	277	first strand
Strand 2	A	280	281	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	356	first strand
Strand 2	A	361	363	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	462	467	first strand
Strand 2	A	419	424	parallel
Strand 3	A	496	502	parallel
Strand 4	A	735	752	anti-parallel
Strand 5	A	511	513	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	462	467	first strand
Strand 2	A	419	424	parallel
Strand 3	A	496	502	parallel
Strand 4	A	735	752	anti-parallel
Strand 5	A	518	527	anti-parallel
Strand 6	A	716	719	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	432	437	first strand
Strand 2	A	440	445	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	40	47	first strand
Strand 2	B	4	11	parallel
Strand 3	B	70	74	parallel
Strand 4	B	93	97	parallel
Strand 5	B	120	122	parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	176	first strand
Strand 2	B	144	149	parallel
Strand 3	B	206	210	parallel
Strand 4	B	234	238	parallel
Strand 5	B	257	264	parallel
Strand 6	B	374	383	anti-parallel
Strand 7	B	387	397	anti-parallel
Strand 8	B	401	403	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	276	277	first strand
Strand 2	B	280	281	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	356	first strand
Strand 2	B	361	363	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	462	467	first strand
Strand 2	B	419	424	parallel
Strand 3	B	496	502	parallel
Strand 4	B	735	752	anti-parallel
Strand 5	B	511	513	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	462	467	first strand
Strand 2	B	419	424	parallel
Strand 3	B	496	502	parallel
Strand 4	B	735	752	anti-parallel
Strand 5	B	518	527	anti-parallel
Strand 6	B	715	719	anti-parallel
Strand 7	B	656	657	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	432	437	first strand
Strand 2	B	440	445	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	40	47	first strand
Strand 2	C	4	11	parallel
Strand 3	C	70	74	parallel
Strand 4	C	93	97	parallel
Strand 5	C	120	122	parallel

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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	171	177	first strand
Strand 2	C	144	150	parallel
Strand 3	C	206	210	parallel
Strand 4	C	234	238	parallel
Strand 5	C	257	264	parallel
Strand 6	C	374	378	anti-parallel
Strand 7	C	392	397	anti-parallel
Strand 8	C	401	403	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	276	277	first strand
Strand 2	C	280	281	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	356	first strand
Strand 2	C	361	363	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	462	467	first strand
Strand 2	C	419	424	parallel
Strand 3	C	496	502	parallel
Strand 4	C	735	751	anti-parallel
Strand 5	C	512	513	anti-parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	462	467	first strand
Strand 2	C	419	424	parallel
Strand 3	C	496	502	parallel
Strand 4	C	735	751	anti-parallel
Strand 5	C	519	527	anti-parallel
Strand 6	C	715	718	anti-parallel
Strand 7	C	656	657	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	432	436	first strand
Strand 2	C	441	445	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	41	46	first strand
Strand 2	D	5	10	parallel
Strand 3	D	70	74	parallel
Strand 4	D	93	97	parallel
Strand 5	D	120	122	parallel

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There are 8 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	171	176	first strand
Strand 2	D	144	149	parallel
Strand 3	D	206	210	parallel
Strand 4	D	234	238	parallel
Strand 5	D	257	264	parallel
Strand 6	D	374	384	anti-parallel
Strand 7	D	387	397	anti-parallel
Strand 8	D	401	404	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	276	277	first strand
Strand 2	D	280	281	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	354	356	first strand
Strand 2	D	361	363	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	462	467	first strand
Strand 2	D	419	424	parallel
Strand 3	D	496	502	parallel
Strand 4	D	735	751	anti-parallel
Strand 5	D	512	513	anti-parallel

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There are 8 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	462	467	first strand
Strand 2	D	419	424	parallel
Strand 3	D	496	502	parallel
Strand 4	D	735	751	anti-parallel
Strand 5	D	518	527	anti-parallel
Strand 6	D	715	718	anti-parallel
Strand 7	D	656	659	parallel
Strand 8	D	698	699	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	432	436	first strand
Strand 2	D	441	445	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6LU9

Analysis of interatomic Contacts of Structural Units in PDB entry:
6LU9