Analysis of interatomic Contacts of Structural Units in PDB entry:
6LUA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LUA entry

There are 6 chains in PDB entry 6LUA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
HIS 130GLY 376
B
HIS 130GLY 376
C
HIS 130GLY 376
D
MET 131GLY 376
E
MET 131GLY 376
F
HIS 130PRO 182
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 88 helices in PDB entry 6LUA. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
135 150Right-handed alpha
Helix 2
AA2
A
163 175Right-handed alpha
Helix 3
AA3
A
195 201Right-handed alpha
Helix 4
AA4
A
217 222Right-handed alpha
Helix 5
AA5
A
231 235Right-handed 310
Helix 6
AA6
A
236 250Right-handed alpha
Helix 7
AA7
A
274 281Right-handed alpha
Helix 8
AA8
A
285 293Right-handed alpha
Helix 9
AA9
A
301 307Right-handed 310
Helix 10
AB1
A
308 323Right-handed alpha
Helix 11
AB2
A
332 341Right-handed alpha
Helix 12
AB3
A
346 362Right-handed alpha
Helix 13
AB4
B
135 150Right-handed alpha
Helix 14
AB5
B
164 175Right-handed alpha
Helix 15
AB6
B
195 201Right-handed alpha
Helix 16
AB7
B
217 222Right-handed alpha
Helix 17
AB8
B
231 235Right-handed 310
Helix 18
AB9
B
236 250Right-handed alpha
Helix 19
AC1
B
274 281Right-handed alpha
Helix 20
AC2
B
285 293Right-handed alpha
Helix 21
AC3
B
301 307Right-handed 310
Helix 22
AC4
B
308 324Right-handed alpha
Helix 23
AC5
B
332 341Right-handed alpha
Helix 24
AC6
B
347 362Right-handed alpha
Helix 25
AC7
B
368 372Right-handed 310
Helix 26
AC8
C
135 150Right-handed alpha
Helix 27
AC9
C
163 175Right-handed alpha
Helix 28
AD1
C
195 201Right-handed alpha
Helix 29
AD2
C
217 222Right-handed alpha
Helix 30
AD3
C
231 235Right-handed 310
Helix 31
AD4
C
236 250Right-handed alpha
Helix 32
AD5
C
274 281Right-handed alpha
Helix 33
AD6
C
285 293Right-handed alpha
Helix 34
AD7
C
301 307Right-handed 310
Helix 35
AD8
C
308 325Right-handed alpha
Helix 36
AD9
C
332 341Right-handed alpha
Helix 37
AE1
C
346 362Right-handed alpha
Helix 38
AE2
D
135 150Right-handed alpha
Helix 39
AE3
D
163 175Right-handed alpha
Helix 40
AE4
D
195 201Right-handed alpha
Helix 41
AE5
D
217 222Right-handed alpha
Helix 42
AE6
D
231 235Right-handed 310
Helix 43
AE7
D
236 250Right-handed alpha
Helix 44
AE8
D
274 281Right-handed alpha
Helix 45
AE9
D
285 293Right-handed alpha
Helix 46
AF1
D
301 307Right-handed 310
Helix 47
AF2
D
308 324Right-handed alpha
Helix 48
AF3
D
332 341Right-handed alpha
Helix 49
AF4
D
346 362Right-handed alpha
Helix 50
AF5
D
368 372Right-handed 310
Helix 51
AF6
E
135 150Right-handed alpha
Helix 52
AF7
E
163 175Right-handed alpha
Helix 53
AF8
E
195 201Right-handed alpha
Helix 54
AF9
E
217 222Right-handed alpha
Helix 55
AG1
E
231 235Right-handed 310
Helix 56
AG2
E
236 250Right-handed alpha
Helix 57
AG3
E
274 281Right-handed alpha
Helix 58
AG4
E
285 293Right-handed alpha
Helix 59
AG5
E
301 307Right-handed 310
Helix 60
AG6
E
308 324Right-handed alpha
Helix 61
AG7
E
332 341Right-handed alpha
Helix 62
AG8
E
346 362Right-handed alpha
Helix 63
AG9
E
368 372Right-handed 310
Helix 64
AH1
F
135 150Right-handed alpha
Helix 65
AH2
F
164 176Right-handed alpha
Helix 66
AH3
F
195 201Right-handed alpha
Helix 67
AH4
F
217 222Right-handed alpha
Helix 68
AH5
F
231 235Right-handed 310
Helix 69
AH6
F
236 250Right-handed alpha
Helix 70
AH7
F
274 281Right-handed alpha
Helix 71
AH8
F
285 293Right-handed alpha
Helix 72
AH9
F
301 307Right-handed 310
Helix 73
AI1
F
308 323Right-handed alpha
Helix 74
AI2
F
332 341Right-handed alpha
Helix 75
AI3
F
346 362Right-handed alpha
Helix 76
AI4
G
135 150Right-handed alpha
Helix 77
AI5
G
163 175Right-handed alpha
Helix 78
AI6
G
191 194Right-handed 310
Helix 79
AI7
G
195 201Right-handed alpha
Helix 80
AI8
G
217 222Right-handed alpha
Helix 81
AI9
G
231 235Right-handed 310
Helix 82
AJ1
G
236 250Right-handed alpha
Helix 83
AJ2
G
274 281Right-handed alpha
Helix 84
AJ3
G
285 293Right-handed alpha
Helix 85
AJ4
G
301 307Right-handed 310
Helix 86
AJ5
G
308 323Right-handed alpha
Helix 87
AJ6
G
332 341Right-handed alpha
Helix 88
AJ7
G
346 362Right-handed alpha
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There are 21 sheets in PDB entry 6LUA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
183 187first strand
Strand 2
A
226 230parallel
Strand 3
A
266 271parallel
Strand 4
A
155 158parallel
Strand 5
A
295 298parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
202 203first strand
Strand 2
A
215 216anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
251 252first strand
Strand 2
A
261 262anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
183 187first strand
Strand 2
B
226 230parallel
Strand 3
B
266 271parallel
Strand 4
B
155 158parallel
Strand 5
B
295 298parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
202 203first strand
Strand 2
B
215 216anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
251 253first strand
Strand 2
B
260 262anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
183 187first strand
Strand 2
C
226 230parallel
Strand 3
C
266 271parallel
Strand 4
C
155 158parallel
Strand 5
C
295 298parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
202 203first strand
Strand 2
C
215 216anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
251 253first strand
Strand 2
C
260 262anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
183 187first strand
Strand 2
D
226 230parallel
Strand 3
D
266 271parallel
Strand 4
D
155 158parallel
Strand 5
D
295 298parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
202 203first strand
Strand 2
D
215 216anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
251 252first strand
Strand 2
D
261 262anti-parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
183 187first strand
Strand 2
E
226 230parallel
Strand 3
E
266 271parallel
Strand 4
E
155 158parallel
Strand 5
E
295 298parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
202 203first strand
Strand 2
E
215 216anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
251 253first strand
Strand 2
E
260 262anti-parallel
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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
183 187first strand
Strand 2
F
226 230parallel
Strand 3
F
266 271parallel
Strand 4
F
155 158parallel
Strand 5
F
295 298parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
202 203first strand
Strand 2
F
215 216anti-parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
251 252first strand
Strand 2
F
261 262anti-parallel
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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
183 187first strand
Strand 2
G
226 230parallel
Strand 3
G
266 271parallel
Strand 4
G
155 158parallel
Strand 5
G
295 298parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
202 203first strand
Strand 2
G
215 216anti-parallel
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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
251 252first strand
Strand 2
G
261 262anti-parallel
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