Analysis of interatomic Contacts of Structural Units in PDB entry:
6LUQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LUQ entry

There is 1 chain in PDB entry 6LUQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 35HIS 463
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6LUQ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
36 62Right-handed alpha
Helix 2
AA2
A
63 66Right-handed 310
Helix 3
AA3
A
67 87Right-handed alpha
Helix 4
AA4
A
87 98Right-handed alpha
Helix 5
AA5
A
103 138Right-handed alpha
Helix 6
AA6
A
145 172Right-handed alpha
Helix 7
AA7
A
182 186Right-handed 310
Helix 8
AA8
A
187 198Right-handed alpha
Helix 9
AA9
A
198 232Right-handed alpha
Helix 10
AB1
A
259 272Right-handed alpha
Helix 11
AB2
A
280 301Right-handed alpha
Helix 12
AB3
A
305 312Right-handed alpha
Helix 13
AB4
A
313 333Right-handed alpha
Helix 14
AB5
A
335 344Right-handed alpha
Helix 15
AB6
A
346 355Right-handed alpha
Helix 16
AB7
A
357 363Right-handed alpha
Helix 17
AB8
A
363 377Right-handed alpha
Helix 18
AB9
A
388 419Right-handed alpha
Helix 19
AC1
A
425 450Right-handed alpha
Helix 20
AC2
A
451 463Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6LUQ.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
235 240first strand
Strand 2
A
246 249anti-parallel
Strand 3
A
252 255anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il