Analysis of interatomic Contacts of Structural Units in PDB entry:
6LUT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LUT entry

There are 4 chains in PDB entry 6LUT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 5PHE 55
A
 MET 57LEU 316
B
 ALA 5PHE 55
B
 MET 57LEU 316
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 6LUT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 20Right-handed alpha
Helix 2
AA2
A
21 23Right-handed 310
Helix 3
AA3
A
31 39Right-handed alpha
Helix 4
AA4
A
48 54Right-handed 310
Helix 5
AA5
A
55 67Right-handed alpha
Helix 6
AA6
A
82 95Right-handed alpha
Helix 7
AA7
A
108 118Right-handed alpha
Helix 8
AA8
A
128 144Right-handed alpha
Helix 9
AA9
A
153 171Right-handed alpha
Helix 10
AB1
A
184 198Right-handed alpha
Helix 11
AB2
A
212 221Right-handed alpha
Helix 12
AB3
A
235 239Right-handed 310
Helix 13
AB4
A
245 254Right-handed alpha
Helix 14
AB5
A
261 277Right-handed alpha
Helix 15
AB6
A
281 293Right-handed alpha
Helix 16
AB7
A
293 298Right-handed alpha
Helix 17
AB8
B
8 20Right-handed alpha
Helix 18
AB9
B
21 23Right-handed 310
Helix 19
AC1
B
31 39Right-handed alpha
Helix 20
AC2
B
48 54Right-handed 310
Helix 21
AC3
B
55 67Right-handed alpha
Helix 22
AC4
B
82 95Right-handed alpha
Helix 23
AC5
B
108 118Right-handed alpha
Helix 24
AC6
B
132 144Right-handed alpha
Helix 25
AC7
B
153 171Right-handed alpha
Helix 26
AC8
B
184 198Right-handed alpha
Helix 27
AC9
B
212 221Right-handed alpha
Helix 28
AD1
B
235 239Right-handed 310
Helix 29
AD2
B
245 254Right-handed alpha
Helix 30
AD3
B
261 277Right-handed alpha
Helix 31
AD4
B
281 292Right-handed alpha
Helix 32
AD5
B
293 298Right-handed alpha
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There are 4 sheets in PDB entry 6LUT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 29first strand
Strand 2
A
41 46anti-parallel
Strand 3
A
304 309parallel
Strand 4
A
176 180parallel
Strand 5
A
202 208parallel
Strand 6
A
256 260parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 125first strand
Strand 2
A
99 104parallel
Strand 3
A
76 78parallel
Strand 4
A
146 147parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 29first strand
Strand 2
B
41 46anti-parallel
Strand 3
B
304 309parallel
Strand 4
B
176 180parallel
Strand 5
B
202 208parallel
Strand 6
B
256 260parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
121 125first strand
Strand 2
B
99 104parallel
Strand 3
B
76 78parallel
Strand 4
B
146 147parallel
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