Analysis of interatomic Contacts of Structural Units in PDB entry:
6LVO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LVO entry

There is 1 chain in PDB entry 6LVO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6LVO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 23Right-handed 310
Helix 2
AA2
A
27 44Right-handed alpha
Helix 3
AA3
A
76 89Right-handed alpha
Helix 4
AA4
A
103 108Right-handed alpha
Helix 5
AA5
A
109 112Right-handed 310
Helix 6
AA6
A
127 131Right-handed 310
Helix 7
AA7
A
137 147Right-handed alpha
Helix 8
AA8
A
147 156Right-handed alpha
Helix 9
AA9
A
162 169Right-handed alpha
Helix 10
AB1
A
180 195Right-handed alpha
Helix 11
AB2
A
196 208Right-handed alpha
Helix 12
AB3
A
211 230Right-handed alpha
Helix 13
AB4
A
232 243Right-handed alpha
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There are 2 sheets in PDB entry 6LVO. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 9first strand
Strand 2
A
12 17anti-parallel
Strand 3
A
49 54parallel
Strand 4
A
93 97parallel
Strand 5
A
114 118parallel
Strand 6
A
174 176parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 102first strand
Strand 2
A
122 124parallel
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