Analysis of interatomic Contacts of Structural Units in PDB entry:
6LVR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LVR entry

There are 26 chains in PDB entry 6LVR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 GLN 94SER 293
A
 SER 95SER 293
D
 G 1 A 9
D
 C 11 G 15
D
 G 18 C 25
D
 C 27 A 31
D
 U 33 U 33
D
 A 35 A 36
D
 A 38 A 38
D
 U 41 G 45
D
 U 47 C 48
D
 U 50 G 53
D
 C 56 G 57
D
 U 59 C 72
B
 G 1 A 9
B
 C 11 G 15
B
 G 18 C 25
B
 C 27 A 31
B
 U 33 U 33
B
 A 35 A 36
B
 A 38 A 38
B
 U 41 G 45
B
 U 47 C 48
B
 U 50 G 53
B
 C 56 G 57
B
 U 59 C 72
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6LVR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
95 111Right-handed alpha
Helix 2
AA2
C
112 126Right-handed alpha
Helix 3
AA3
C
131 144Right-handed alpha
Helix 4
AA4
C
155 170Right-handed alpha
Helix 5
AA5
C
175 189Right-handed alpha
Helix 6
AA6
C
191 205Right-handed alpha
Helix 7
AA7
C
210 225Right-handed alpha
Helix 8
AA8
C
226 240Right-handed alpha
Helix 9
AA9
C
245 259Right-handed alpha
Helix 10
AB1
C
261 276Right-handed alpha
Helix 11
AB2
C
280 293Right-handed alpha
Helix 12
AB3
A
96 111Right-handed alpha
Helix 13
AB4
A
112 127Right-handed alpha
Helix 14
AB5
A
131 142Right-handed alpha
Helix 15
AB6
A
155 170Right-handed alpha
Helix 16
AB7
A
175 189Right-handed alpha
Helix 17
AB8
A
191 205Right-handed alpha
Helix 18
AB9
A
210 224Right-handed alpha
Helix 19
AC1
A
226 240Right-handed alpha
Helix 20
AC2
A
245 259Right-handed alpha
Helix 21
AC3
A
261 274Right-handed alpha
Helix 22
AC4
A
280 293Right-handed alpha
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There are no sheets in PDB entry 6LVR
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