Analysis of interatomic Contacts of Structural Units in PDB entry:
6LVW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LVW entry

There is 1 chain in PDB entry 6LVW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 696
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6LVW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 28Right-handed alpha
Helix 2
AA2
A
38 43Right-handed alpha
Helix 3
AA3
A
51 64Right-handed alpha
Helix 4
AA4
A
73 76Right-handed 310
Helix 5
AA5
A
78 85Right-handed alpha
Helix 6
AA6
A
86 89Right-handed 310
Helix 7
AA7
A
110 127Right-handed alpha
Helix 8
AA8
A
153 169Right-handed alpha
Helix 9
AA9
A
170 179Right-handed alpha
Helix 10
AB1
A
181 185Right-handed 310
Helix 11
AB2
A
189 193Right-handed 310
Helix 12
AB3
A
204 234Right-handed alpha
Helix 13
AB4
A
251 257Right-handed alpha
Helix 14
AB5
A
267 272Right-handed alpha
Helix 15
AB6
A
281 288Right-handed alpha
Helix 16
AB7
A
289 302Right-handed alpha
Helix 17
AB8
A
330 343Right-handed alpha
Helix 18
AB9
A
374 390Right-handed alpha
Helix 19
AC1
A
405 415Right-handed alpha
Helix 20
AC2
A
422 436Right-handed alpha
Helix 21
AC3
A
465 479Right-handed alpha
Helix 22
AC4
A
503 507Right-handed 310
Helix 23
AC5
A
596 611Right-handed alpha
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There are 6 sheets in PDB entry 6LVW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 6first strand
Strand 2
A
29 34parallel
Strand 3
A
67 71parallel
Strand 4
A
134 138parallel
Strand 5
A
239 243parallel
Strand 6
A
261 266parallel
Strand 7
A
309 313parallel
Strand 8
A
346 350parallel
Strand 9
A
2 6parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
441 444first strand
Strand 2
A
400 403parallel
Strand 3
A
455 458parallel
Strand 4
A
481 484parallel
Strand 5
A
587 591parallel
Strand 6
A
578 582anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
512 519first strand
Strand 2
A
546 557anti-parallel
Strand 3
A
527 530anti-parallel
Strand 4
A
564 566anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
512 519first strand
Strand 2
A
546 557anti-parallel
Strand 3
A
593 595anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
623 628first strand
Strand 2
A
631 636anti-parallel
Strand 3
A
687 688anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
642 644first strand
Strand 2
A
677 679anti-parallel
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