Analysis of interatomic Contacts of Structural Units in PDB entry:
6LW1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LW1 entry

There are 2 chains in PDB entry 6LW1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 27LEU 835
B
 ALA 27LEU 835
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 6LW1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
168 172Right-handed 310
Helix 2
AA2
A
273 277Right-handed 310
Helix 3
AA3
A
325 327Right-handed 310
Helix 4
AA4
A
328 333Right-handed alpha
Helix 5
AA5
A
334 339Right-handed 310
Helix 6
AA6
A
363 369Right-handed 310
Helix 7
AA7
A
387 396Right-handed 310
Helix 8
AA8
A
414 419Right-handed 310
Helix 9
AA9
A
491 495Right-handed 310
Helix 10
AB1
A
576 582Right-handed alpha
Helix 11
AB2
A
630 635Right-handed alpha
Helix 12
AB3
A
669 673Right-handed 310
Helix 13
AB4
A
694 698Right-handed 310
Helix 14
AB5
A
717 722Right-handed alpha
Helix 15
AB6
A
768 773Right-handed alpha
Helix 16
AB7
A
788 790Right-handed 310
Helix 17
AB8
A
791 799Right-handed alpha
Helix 18
AB9
A
817 821Right-handed 310
Helix 19
AC1
A
830 834Right-handed 310
Helix 20
AC2
B
168 172Right-handed 310
Helix 21
AC3
B
273 277Right-handed 310
Helix 22
AC4
B
325 327Right-handed 310
Helix 23
AC5
B
328 333Right-handed alpha
Helix 24
AC6
B
334 339Right-handed 310
Helix 25
AC7
B
363 369Right-handed 310
Helix 26
AC8
B
387 396Right-handed 310
Helix 27
AC9
B
414 419Right-handed 310
Helix 28
AD1
B
491 495Right-handed 310
Helix 29
AD2
B
576 582Right-handed alpha
Helix 30
AD3
B
630 635Right-handed alpha
Helix 31
AD4
B
669 673Right-handed 310
Helix 32
AD5
B
694 698Right-handed 310
Helix 33
AD6
B
717 722Right-handed alpha
Helix 34
AD7
B
768 773Right-handed alpha
Helix 35
AD8
B
788 790Right-handed 310
Helix 36
AD9
B
791 799Right-handed alpha
Helix 37
AE1
B
817 821Right-handed 310
Helix 38
AE2
B
830 834Right-handed 310
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There are 16 sheets in PDB entry 6LW1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 41first strand
Strand 2
A
46 50anti-parallel
Strand 3
A
69 71parallel
Strand 4
A
93 95parallel
Strand 5
A
131 133parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 154first strand
Strand 2
A
176 178parallel
Strand 3
A
208 210parallel
Strand 4
A
229 231parallel
Strand 5
A
253 255parallel
Strand 6
A
294 296parallel
Strand 7
A
318 320parallel
Strand 8
A
344 346parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 163first strand
Strand 2
A
194 195parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
384 385first strand
Strand 2
A
411 412parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
401 403first strand
Strand 2
A
425 427parallel
Strand 3
A
497 499parallel
Strand 4
A
521 523parallel
Strand 5
A
546 548parallel
Strand 6
A
570 572parallel
Strand 7
A
600 602parallel
Strand 8
A
623 625parallel
Strand 9
A
654 656parallel
Strand 10
A
679 680parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
530 532first strand
Strand 2
A
553 555parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
752 753first strand
Strand 2
A
778 779parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
813 814first strand
Strand 2
A
823 824anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 41first strand
Strand 2
B
46 50anti-parallel
Strand 3
B
69 71parallel
Strand 4
B
93 95parallel
Strand 5
B
131 133parallel
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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
152 154first strand
Strand 2
B
176 178parallel
Strand 3
B
208 210parallel
Strand 4
B
229 231parallel
Strand 5
B
253 255parallel
Strand 6
B
294 296parallel
Strand 7
B
318 320parallel
Strand 8
B
344 346parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 163first strand
Strand 2
B
194 195parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
384 385first strand
Strand 2
B
411 412parallel
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There are 10 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
401 403first strand
Strand 2
B
425 427parallel
Strand 3
B
497 499parallel
Strand 4
B
521 523parallel
Strand 5
B
546 548parallel
Strand 6
B
570 572parallel
Strand 7
B
600 602parallel
Strand 8
B
623 625parallel
Strand 9
B
654 656parallel
Strand 10
B
679 680parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
530 532first strand
Strand 2
B
553 555parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
752 753first strand
Strand 2
B
778 779parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
813 814first strand
Strand 2
B
823 824anti-parallel
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