Analysis of interatomic Contacts of Structural Units in PDB entry:
6LX1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LX1 entry

There is 1 chain in PDB entry 6LX1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2LEU 524
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 32 helices in PDB entry 6LX1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 16Right-handed 310
Helix 2
AA2
A
21 25Right-handed 310
Helix 3
AA3
A
33 37Right-handed 310
Helix 4
AA4
A
47 61Right-handed alpha
Helix 5
AA5
A
93 97Right-handed 310
Helix 6
AA6
A
98 105Right-handed alpha
Helix 7
AA7
A
109 113Right-handed 310
Helix 8
AA8
A
126 145Right-handed alpha
Helix 9
AA9
A
147 159Right-handed alpha
Helix 10
AB1
A
159 180Right-handed alpha
Helix 11
AB2
A
183 187Right-handed 310
Helix 12
AB3
A
188 193Right-handed alpha
Helix 13
AB4
A
195 206Right-handed alpha
Helix 14
AB5
A
206 234Right-handed alpha
Helix 15
AB6
A
250 255Right-handed alpha
Helix 16
AB7
A
256 260Right-handed 310
Helix 17
AB8
A
292 299Right-handed alpha
Helix 18
AB9
A
301 315Right-handed alpha
Helix 19
AC1
A
322 326Right-handed 310
Helix 20
AC2
A
338 342Right-handed 310
Helix 21
AC3
A
349 361Right-handed alpha
Helix 22
AC4
A
374 384Right-handed alpha
Helix 23
AC5
A
393 395Right-handed 310
Helix 24
AC6
A
405 409Right-handed 310
Helix 25
AC7
A
424 431Right-handed alpha
Helix 26
AC8
A
433 444Right-handed alpha
Helix 27
AC9
A
448 450Right-handed 310
Helix 28
AD1
A
451 462Right-handed alpha
Helix 29
AD2
A
472 476Right-handed alpha
Helix 30
AD3
A
479 483Right-handed 310
Helix 31
AD4
A
503 506Right-handed 310
Helix 32
AD5
A
507 521Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 6LX1. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 367first strand
Strand 2
A
317 321parallel
Strand 3
A
237 243parallel
Strand 4
A
64 66parallel
Strand 5
A
27 31parallel
Strand 6
A
467 471parallel
Strand 7
A
413 416parallel
Strand 8
A
388 391parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 289first strand
Strand 2
A
270 274anti-parallel
Strand 3
A
328 333anti-parallel
Strand 4
A
343 346anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il