Analysis of interatomic Contacts of Structural Units in PDB entry:
6LXE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LXE entry

There are 3 chains in PDB entry 6LXE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 411ASP 1257
B
 PRO 727ARG 750
C
 LEU 729THR 749
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 6LXE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
438 452Right-handed alpha
Helix 2
AA2
A
546 550Right-handed 310
Helix 3
AA3
A
641 654Right-handed alpha
Helix 4
AA4
A
698 709Right-handed alpha
Helix 5
AA5
A
719 726Right-handed alpha
Helix 6
AA6
A
727 736Right-handed alpha
Helix 7
AA7
A
790 804Right-handed alpha
Helix 8
AA8
A
811 829Right-handed alpha
Helix 9
AA9
A
853 861Right-handed alpha
Helix 10
AB1
A
861 876Right-handed alpha
Helix 11
AB2
A
879 884Right-handed alpha
Helix 12
AB3
A
890 897Right-handed alpha
Helix 13
AB4
A
909 919Right-handed alpha
Helix 14
AB5
A
965 988Right-handed alpha
Helix 15
AB6
A
992 1005Right-handed alpha
Helix 16
AB7
A
1005 1014Right-handed alpha
Helix 17
AB8
A
1032 1055Right-handed alpha
Helix 18
AB9
A
1056 1069Right-handed alpha
Helix 19
AC1
A
1075 1080Right-handed alpha
Helix 20
AC2
A
1084 1089Right-handed alpha
Helix 21
AC3
A
1094 1098Right-handed 310
Helix 22
AC4
A
1104 1115Right-handed alpha
Helix 23
AC5
A
1121 1128Right-handed alpha
Helix 24
AC6
A
1145 1165Right-handed alpha
Helix 25
AC7
A
1170 1180Right-handed alpha
Helix 26
AC8
A
1183 1195Right-handed alpha
Helix 27
AC9
A
1213 1232Right-handed alpha
Helix 28
AD1
A
1233 1245Right-handed alpha
Helix 29
AD2
A
1248 1255Right-handed alpha
Helix 30
AD3
B
728 750Right-handed alpha
Helix 31
AD4
C
730 747Right-handed alpha
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There are 3 sheets in PDB entry 6LXE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
413 415first strand
Strand 2
A
694 696parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
619 621first strand
Strand 2
A
626 633anti-parallel
Strand 3
A
572 578anti-parallel
Strand 4
A
604 608anti-parallel
Strand 5
A
680 683anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
740 742first strand
Strand 2
A
752 754anti-parallel
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