Analysis of interatomic Contacts of Structural Units in PDB entry:
6LXH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6LXH entry

There are 3 chains in PDB entry 6LXH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 7	LYS 320
B	GLY 6	SER 306
C	GLY 6	LYS 320

There are 16 helices in PDB entry 6LXH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	9	11	Right-handed 310
Helix 2	AA2	A	110	114	Right-handed alpha
Helix 3	AA3	A	222	226	Right-handed 310
Helix 4	AA4	A	233	237	Right-handed 310
Helix 5	AA5	A	241	244	Right-handed 310
Helix 6	AA6	B	9	11	Right-handed 310
Helix 7	AA7	B	110	115	Right-handed alpha
Helix 8	AA8	B	209	213	Right-handed 310
Helix 9	AA9	B	222	226	Right-handed 310
Helix 10	AB1	B	233	237	Right-handed 310
Helix 11	AB2	B	241	244	Right-handed 310
Helix 12	AB3	C	110	114	Right-handed alpha
Helix 13	AB4	C	209	213	Right-handed 310
Helix 14	AB5	C	222	226	Right-handed 310
Helix 15	AB6	C	233	237	Right-handed 310
Helix 16	AB7	C	241	244	Right-handed 310

There are 16 sheets in PDB entry 6LXH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	13	23	first strand
Strand 2	A	43	52	anti-parallel
Strand 3	A	115	128	anti-parallel
Strand 4	A	70	72	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	13	23	first strand
Strand 2	A	43	52	anti-parallel
Strand 3	A	115	128	anti-parallel
Strand 4	C	311	318	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	26	27	first strand
Strand 2	A	34	37	anti-parallel
Strand 3	A	149	158	parallel
Strand 4	A	138	146	anti-parallel
Strand 5	A	61	66	anti-parallel
Strand 6	A	103	108	anti-parallel
Strand 7	A	91	98	anti-parallel
Strand 8	A	81	85	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	167	174	first strand
Strand 2	A	181	187	anti-parallel
Strand 3	A	270	279	anti-parallel
Strand 4	A	197	207	anti-parallel
Strand 5	A	254	258	anti-parallel
Strand 6	A	246	249	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	238	239	first strand
Strand 2	A	216	219	anti-parallel
Strand 3	A	270	279	anti-parallel
Strand 4	A	197	207	anti-parallel
Strand 5	A	287	294	anti-parallel
Strand 6	A	298	304	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	318	first strand
Strand 2	C	115	128	anti-parallel
Strand 3	C	43	52	anti-parallel
Strand 4	C	13	23	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	318	first strand
Strand 2	C	115	128	anti-parallel
Strand 3	C	70	72	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	13	23	first strand
Strand 2	B	43	52	anti-parallel
Strand 3	B	118	128	anti-parallel
Strand 4	B	70	72	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	26	27	first strand
Strand 2	B	34	37	anti-parallel
Strand 3	B	149	158	parallel
Strand 4	B	138	146	anti-parallel
Strand 5	B	61	66	anti-parallel
Strand 6	B	103	108	anti-parallel
Strand 7	B	91	98	anti-parallel
Strand 8	B	81	85	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	167	174	first strand
Strand 2	B	181	187	anti-parallel
Strand 3	B	270	278	anti-parallel
Strand 4	B	206	207	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	167	174	first strand
Strand 2	B	181	187	anti-parallel
Strand 3	B	270	278	anti-parallel
Strand 4	B	216	219	anti-parallel
Strand 5	B	238	239	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	246	249	first strand
Strand 2	B	254	258	anti-parallel
Strand 3	B	197	204	anti-parallel
Strand 4	B	287	294	anti-parallel
Strand 5	B	298	304	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	26	28	first strand
Strand 2	C	33	37	anti-parallel
Strand 3	C	149	158	parallel
Strand 4	C	138	146	anti-parallel
Strand 5	C	61	66	anti-parallel
Strand 6	C	103	108	anti-parallel
Strand 7	C	91	98	anti-parallel
Strand 8	C	81	85	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	167	174	first strand
Strand 2	C	181	187	anti-parallel
Strand 3	C	270	278	anti-parallel
Strand 4	C	206	207	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	167	174	first strand
Strand 2	C	181	187	anti-parallel
Strand 3	C	270	278	anti-parallel
Strand 4	C	216	219	anti-parallel
Strand 5	C	238	239	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	246	249	first strand
Strand 2	C	254	258	anti-parallel
Strand 3	C	197	204	anti-parallel
Strand 4	C	286	294	anti-parallel
Strand 5	C	298	305	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6LXH

Analysis of interatomic Contacts of Structural Units in PDB entry:
6LXH