Analysis of interatomic Contacts of Structural Units in PDB entry:
6LZJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LZJ entry

There is 1 chain in PDB entry 6LZJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 12LYS 303
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6LZJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 30Right-handed alpha
Helix 2
AA2
A
57 62Right-handed alpha
Helix 3
AA3
A
63 66Right-handed 310
Helix 4
AA4
A
91 97Right-handed alpha
Helix 5
AA5
A
146 152Right-handed alpha
Helix 6
AA6
A
155 174Right-handed alpha
Helix 7
AA7
A
195 205Right-handed alpha
Helix 8
AA8
A
244 255Right-handed alpha
Helix 9
AA9
A
292 299Right-handed alpha
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There are 2 sheets in PDB entry 6LZJ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 129first strand
Strand 2
A
113 119anti-parallel
Strand 3
A
100 106anti-parallel
Strand 4
A
134 140anti-parallel
Strand 5
A
46 51anti-parallel
Strand 6
A
34 40anti-parallel
Strand 7
A
178 183parallel
Strand 8
A
186 191anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 213first strand
Strand 2
A
219 225anti-parallel
Strand 3
A
260 266anti-parallel
Strand 4
A
232 237parallel
Strand 5
A
240 241anti-parallel
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