Analysis of interatomic Contacts of Structural Units in PDB entry:
6M0Q

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6M0Q entry

There are 5 chains in PDB entry 6M0Q (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 25	LYS 528
B	SER 28	TYR 91
C	ASP 25	LYS 528
D	SER 28	TYR 91
E	ASP 25	GLU 147

There are221 helices in PDB entry 6M0Q. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	30	37	Right-handed alpha
Helix 2	AA2	A	45	58	Right-handed alpha
Helix 3	AA3	A	59	63	Right-handed 310
Helix 4	AA4	A	69	73	Right-handed 310
Helix 5	AA5	A	78	83	Right-handed alpha
Helix 6	AA6	A	83	88	Right-handed alpha
Helix 7	AA7	A	99	111	Right-handed alpha
Helix 8	AA8	A	111	121	Right-handed alpha
Helix 9	AA9	A	122	124	Right-handed 310
Helix 10	AB1	A	125	131	Right-handed alpha
Helix 11	AB2	A	136	138	Right-handed 310
Helix 12	AB3	A	139	155	Right-handed alpha
Helix 13	AB4	A	168	174	Right-handed alpha
Helix 14	AB5	A	184	188	Right-handed alpha
Helix 15	AB6	A	192	200	Right-handed alpha
Helix 16	AB7	A	200	209	Right-handed alpha
Helix 17	AB8	A	209	214	Right-handed alpha
Helix 18	AB9	A	230	237	Right-handed alpha
Helix 19	AC1	A	238	244	Right-handed alpha
Helix 20	AC2	A	246	256	Right-handed alpha
Helix 21	AC3	A	273	278	Right-handed alpha
Helix 22	AC4	A	279	284	Right-handed 310
Helix 23	AC5	A	293	301	Right-handed alpha
Helix 24	AC6	A	301	311	Right-handed alpha
Helix 25	AC7	A	312	314	Right-handed 310
Helix 26	AC8	A	319	323	Right-handed 310
Helix 27	AC9	A	333	339	Right-handed alpha
Helix 28	AD1	A	365	369	Right-handed 310
Helix 29	AD2	A	370	385	Right-handed alpha
Helix 30	AD3	A	389	425	Right-handed alpha
Helix 31	AD4	A	447	452	Right-handed 310
Helix 32	AD5	A	460	472	Right-handed alpha
Helix 33	AD6	A	472	483	Right-handed alpha
Helix 34	AD7	A	485	489	Right-handed 310
Helix 35	AD8	A	494	527	Right-handed alpha
Helix 36	AD9	B	34	44	Right-handed alpha
Helix 37	AE1	B	69	84	Right-handed alpha
Helix 38	AE2	B	85	87	Right-handed 310
Helix 39	AE3	C	30	37	Right-handed alpha
Helix 40	AE4	C	45	58	Right-handed alpha
Helix 41	AE5	C	59	63	Right-handed 310
Helix 42	AE6	C	69	73	Right-handed 310
Helix 43	AE7	C	78	83	Right-handed alpha
Helix 44	AE8	C	83	88	Right-handed alpha
Helix 45	AE9	C	99	111	Right-handed alpha
Helix 46	AF1	C	111	121	Right-handed alpha
Helix 47	AF2	C	122	124	Right-handed 310
Helix 48	AF3	C	125	131	Right-handed alpha
Helix 49	AF4	C	139	155	Right-handed alpha
Helix 50	AF5	C	168	174	Right-handed alpha
Helix 51	AF6	C	192	200	Right-handed alpha
Helix 52	AF7	C	200	209	Right-handed alpha
Helix 53	AF8	C	209	214	Right-handed alpha
Helix 54	AF9	C	230	237	Right-handed alpha
Helix 55	AG1	C	238	244	Right-handed alpha
Helix 56	AG2	C	246	256	Right-handed alpha
Helix 57	AG3	C	273	279	Right-handed alpha
Helix 58	AG4	C	280	285	Right-handed alpha
Helix 59	AG5	C	293	301	Right-handed alpha
Helix 60	AG6	C	301	311	Right-handed alpha
Helix 61	AG7	C	312	314	Right-handed 310
Helix 62	AG8	C	319	324	Right-handed alpha
Helix 63	AG9	C	333	339	Right-handed alpha
Helix 64	AH1	C	363	368	Right-handed alpha
Helix 65	AH2	C	370	385	Right-handed alpha
Helix 66	AH3	C	389	424	Right-handed alpha
Helix 67	AH4	C	447	452	Right-handed 310
Helix 68	AH5	C	460	472	Right-handed alpha
Helix 69	AH6	C	472	483	Right-handed alpha
Helix 70	AH7	C	485	489	Right-handed 310
Helix 71	AH8	C	494	527	Right-handed alpha
Helix 72	AH9	D	34	44	Right-handed alpha
Helix 73	AI1	D	69	84	Right-handed alpha
Helix 74	AI2	D	85	87	Right-handed 310
Helix 75	AI3	E	30	37	Right-handed alpha
Helix 76	AI4	E	45	59	Right-handed alpha
Helix 77	AI5	E	60	63	Right-handed 310
Helix 78	AI6	E	69	73	Right-handed 310
Helix 79	AI7	E	78	83	Right-handed alpha
Helix 80	AI8	E	83	88	Right-handed alpha
Helix 81	AI9	E	99	111	Right-handed alpha
Helix 82	AJ1	E	111	121	Right-handed alpha
Helix 83	AJ2	E	122	124	Right-handed 310
Helix 84	AJ3	E	125	131	Right-handed alpha
Helix 85	AJ4	E	139	155	Right-handed alpha
Helix 86	AJ5	E	168	174	Right-handed alpha
Helix 87	AJ6	E	192	200	Right-handed alpha
Helix 88	AJ7	E	200	209	Right-handed alpha
Helix 89	AJ8	E	209	214	Right-handed alpha
Helix 90	AJ9	E	230	237	Right-handed alpha
Helix 91	AK1	E	238	244	Right-handed alpha
Helix 92	AK2	E	246	256	Right-handed alpha
Helix 93	AK3	E	273	278	Right-handed alpha
Helix 94	AK4	E	280	285	Right-handed alpha
Helix 95	AK5	E	293	301	Right-handed alpha
Helix 96	AK6	E	301	311	Right-handed alpha
Helix 97	AK7	E	319	324	Right-handed alpha
Helix 98	AK8	E	333	339	Right-handed alpha
Helix 99	AK9	E	363	368	Right-handed alpha
Helix 100	AL1	E	370	385	Right-handed alpha
Helix 101	AL2	E	389	424	Right-handed alpha
Helix 102	AL3	E	448	453	Right-handed alpha
Helix 103	AL4	E	460	472	Right-handed alpha
Helix 104	AL5	E	472	483	Right-handed alpha
Helix 105	AL6	E	485	489	Right-handed 310
Helix 106	AL7	E	494	528	Right-handed alpha
Helix 107	AL8	F	34	44	Right-handed alpha
Helix 108	AL9	F	69	84	Right-handed alpha
Helix 109	AM1	F	85	87	Right-handed 310
Helix 110	AM2	G	30	37	Right-handed alpha
Helix 111	AM3	G	45	59	Right-handed alpha
Helix 112	AM4	G	60	63	Right-handed 310
Helix 113	AM5	G	69	73	Right-handed 310
Helix 114	AM6	G	78	83	Right-handed alpha
Helix 115	AM7	G	83	88	Right-handed alpha
Helix 116	AM8	G	99	111	Right-handed alpha
Helix 117	AM9	G	111	120	Right-handed alpha
Helix 118	AN1	G	121	124	Right-handed 310
Helix 119	AN2	G	125	131	Right-handed alpha
Helix 120	AN3	G	139	155	Right-handed alpha
Helix 121	AN4	G	168	174	Right-handed alpha
Helix 122	AN5	G	184	188	Right-handed alpha
Helix 123	AN6	G	192	200	Right-handed alpha
Helix 124	AN7	G	200	209	Right-handed alpha
Helix 125	AN8	G	209	214	Right-handed alpha
Helix 126	AN9	G	230	237	Right-handed alpha
Helix 127	AO1	G	238	244	Right-handed alpha
Helix 128	AO2	G	246	256	Right-handed alpha
Helix 129	AO3	G	273	279	Right-handed alpha
Helix 130	AO4	G	280	284	Right-handed 310
Helix 131	AO5	G	293	301	Right-handed alpha
Helix 132	AO6	G	301	311	Right-handed alpha
Helix 133	AO7	G	312	314	Right-handed 310
Helix 134	AO8	G	319	324	Right-handed alpha
Helix 135	AO9	G	333	339	Right-handed alpha
Helix 136	AP1	G	365	369	Right-handed 310
Helix 137	AP2	G	370	385	Right-handed alpha
Helix 138	AP3	G	389	425	Right-handed alpha
Helix 139	AP4	G	447	452	Right-handed 310
Helix 140	AP5	G	460	472	Right-handed alpha
Helix 141	AP6	G	472	483	Right-handed alpha
Helix 142	AP7	G	485	489	Right-handed 310
Helix 143	AP8	G	494	527	Right-handed alpha
Helix 144	AP9	H	34	44	Right-handed alpha
Helix 145	AQ1	H	69	84	Right-handed alpha
Helix 146	AQ2	H	85	87	Right-handed 310
Helix 147	AQ3	I	30	37	Right-handed alpha
Helix 148	AQ4	I	45	58	Right-handed alpha
Helix 149	AQ5	I	59	63	Right-handed 310
Helix 150	AQ6	I	69	73	Right-handed 310
Helix 151	AQ7	I	78	83	Right-handed alpha
Helix 152	AQ8	I	83	88	Right-handed alpha
Helix 153	AQ9	I	99	111	Right-handed alpha
Helix 154	AR1	I	111	121	Right-handed alpha
Helix 155	AR2	I	122	124	Right-handed 310
Helix 156	AR3	I	125	131	Right-handed alpha
Helix 157	AR4	I	136	138	Right-handed 310
Helix 158	AR5	I	139	155	Right-handed alpha
Helix 159	AR6	I	168	174	Right-handed alpha
Helix 160	AR7	I	184	188	Right-handed alpha
Helix 161	AR8	I	192	200	Right-handed alpha
Helix 162	AR9	I	200	209	Right-handed alpha
Helix 163	AS1	I	209	214	Right-handed alpha
Helix 164	AS2	I	227	229	Right-handed 310
Helix 165	AS3	I	230	237	Right-handed alpha
Helix 166	AS4	I	238	244	Right-handed alpha
Helix 167	AS5	I	246	256	Right-handed alpha
Helix 168	AS6	I	273	279	Right-handed alpha
Helix 169	AS7	I	280	285	Right-handed alpha
Helix 170	AS8	I	293	301	Right-handed alpha
Helix 171	AS9	I	301	311	Right-handed alpha
Helix 172	AT1	I	319	324	Right-handed alpha
Helix 173	AT2	I	333	339	Right-handed alpha
Helix 174	AT3	I	363	368	Right-handed alpha
Helix 175	AT4	I	370	385	Right-handed alpha
Helix 176	AT5	I	389	425	Right-handed alpha
Helix 177	AT6	I	447	452	Right-handed 310
Helix 178	AT7	I	460	472	Right-handed alpha
Helix 179	AT8	I	472	484	Right-handed alpha
Helix 180	AT9	I	485	489	Right-handed 310
Helix 181	AU1	I	494	527	Right-handed alpha
Helix 182	AU2	J	34	44	Right-handed alpha
Helix 183	AU3	J	69	84	Right-handed alpha
Helix 184	AU4	J	85	87	Right-handed 310
Helix 185	AU5	K	30	37	Right-handed alpha
Helix 186	AU6	K	45	58	Right-handed alpha
Helix 187	AU7	K	59	63	Right-handed 310
Helix 188	AU8	K	69	73	Right-handed 310
Helix 189	AU9	K	78	83	Right-handed alpha
Helix 190	AV1	K	83	88	Right-handed alpha
Helix 191	AV2	K	99	111	Right-handed alpha
Helix 192	AV3	K	111	121	Right-handed alpha
Helix 193	AV4	K	122	124	Right-handed 310
Helix 194	AV5	K	125	131	Right-handed alpha
Helix 195	AV6	K	139	155	Right-handed alpha
Helix 196	AV7	K	168	174	Right-handed alpha
Helix 197	AV8	K	184	188	Right-handed alpha
Helix 198	AV9	K	192	197	Right-handed alpha
Helix 199	AW1	K	200	209	Right-handed alpha
Helix 200	AW2	K	209	214	Right-handed alpha
Helix 201	AW3	K	230	237	Right-handed alpha
Helix 202	AW4	K	238	244	Right-handed alpha
Helix 203	AW5	K	246	256	Right-handed alpha
Helix 204	AW6	K	273	278	Right-handed alpha
Helix 205	AW7	K	280	285	Right-handed alpha
Helix 206	AW8	K	293	301	Right-handed alpha
Helix 207	AW9	K	301	311	Right-handed alpha
Helix 208	AX1	K	312	314	Right-handed 310
Helix 209	AX2	K	319	323	Right-handed 310
Helix 210	AX3	K	333	339	Right-handed alpha
Helix 211	AX4	K	363	368	Right-handed alpha
Helix 212	AX5	K	370	385	Right-handed alpha
Helix 213	AX6	K	389	425	Right-handed alpha
Helix 214	AX7	K	448	453	Right-handed alpha
Helix 215	AX8	K	460	472	Right-handed alpha
Helix 216	AX9	K	472	483	Right-handed alpha
Helix 217	AY1	K	485	489	Right-handed 310
Helix 218	AY2	K	494	527	Right-handed alpha
Helix 219	AY3	L	34	44	Right-handed alpha
Helix 220	AY4	L	69	84	Right-handed alpha
Helix 221	AY5	L	85	87	Right-handed 310

There are 18 sheets in PDB entry 6M0Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	98	first strand
Strand 2	A	182	183	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	340	341	first strand
Strand 2	A	344	345	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	60	first strand
Strand 2	B	63	68	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	97	98	first strand
Strand 2	C	182	183	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	340	341	first strand
Strand 2	C	344	345	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	52	60	first strand
Strand 2	D	63	68	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	97	98	first strand
Strand 2	E	182	183	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	340	341	first strand
Strand 2	E	344	345	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	52	60	first strand
Strand 2	F	63	68	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	97	98	first strand
Strand 2	G	182	183	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	340	341	first strand
Strand 2	G	344	345	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	52	60	first strand
Strand 2	H	63	68	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	97	98	first strand
Strand 2	I	182	183	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	340	341	first strand
Strand 2	I	344	345	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	52	60	first strand
Strand 2	J	63	68	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	97	98	first strand
Strand 2	K	182	183	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	340	341	first strand
Strand 2	K	344	345	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	52	60	first strand
Strand 2	L	63	68	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6M0Q

Analysis of interatomic Contacts of Structural Units in PDB entry:
6M0Q