Analysis of interatomic Contacts of Structural Units in PDB entry:
6M37


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6M37 entry

There are 4 chains in PDB entry 6M37 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 5ASN 144
B
 ASN 2ALA 102
C
 ASP 6ASN 144
D
 ASN 2SER 101
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6M37. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 17Right-handed 310
Helix 2
AA2
A
18 33Right-handed alpha
Helix 3
AA3
A
36 61Right-handed alpha
Helix 4
AA4
A
114 124Right-handed alpha
Helix 5
AA5
B
26 40Right-handed alpha
Helix 6
AA6
B
55 72Right-handed alpha
Helix 7
AA7
B
82 92Right-handed alpha
Helix 8
AA8
C
15 17Right-handed 310
Helix 9
AA9
C
18 33Right-handed alpha
Helix 10
AB1
C
36 62Right-handed alpha
Helix 11
AB2
C
114 124Right-handed alpha
Helix 12
AB3
D
26 41Right-handed alpha
Helix 13
AB4
D
55 71Right-handed alpha
Helix 14
AB5
D
82 92Right-handed alpha
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There are 3 sheets in PDB entry 6M37. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 130first strand
Strand 2
A
136 142anti-parallel
Strand 3
A
77 83anti-parallel
Strand 4
A
66 73anti-parallel
Strand 5
A
6 13anti-parallel
Strand 6
C
7 13anti-parallel
Strand 7
C
66 73anti-parallel
Strand 8
C
77 83anti-parallel
Strand 9
C
136 142anti-parallel
Strand 10
C
126 130anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 10first strand
Strand 2
B
13 22anti-parallel
Strand 3
B
44 54parallel
Strand 4
B
76 79parallel
Strand 5
B
99 100parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 10first strand
Strand 2
D
13 22anti-parallel
Strand 3
D
43 54parallel
Strand 4
D
75 79parallel
Strand 5
D
99 100parallel
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