Analysis of interatomic Contacts of Structural Units in PDB entry:
6M3F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6M3F entry

There are 2 chains in PDB entry 6M3F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLU 60ARG 282
C
 GLU 60GLY 284
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6M3F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
97 102Right-handed alpha
Helix 2
AA2
B
119 123Right-handed 310
Helix 3
AA3
B
125 130Right-handed alpha
Helix 4
AA4
B
141 145Right-handed 310
Helix 5
AA5
B
148 155Right-handed alpha
Helix 6
AA6
B
156 159Right-handed 310
Helix 7
AA7
B
165 171Right-handed alpha
Helix 8
AA8
B
171 183Right-handed alpha
Helix 9
AA9
B
184 186Right-handed 310
Helix 10
AB1
B
235 237Right-handed 310
Helix 11
AB2
B
256 261Right-handed 310
Helix 12
AB3
B
263 272Right-handed alpha
Helix 13
AB4
B
275 281Right-handed alpha
Helix 14
AB5
C
119 123Right-handed 310
Helix 15
AB6
C
125 130Right-handed alpha
Helix 16
AB7
C
141 145Right-handed 310
Helix 17
AB8
C
148 155Right-handed alpha
Helix 18
AB9
C
156 159Right-handed 310
Helix 19
AC1
C
165 171Right-handed alpha
Helix 20
AC2
C
171 183Right-handed alpha
Helix 21
AC3
C
184 186Right-handed 310
Helix 22
AC4
C
235 237Right-handed 310
Helix 23
AC5
C
256 261Right-handed 310
Helix 24
AC6
C
263 272Right-handed alpha
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There are 6 sheets in PDB entry 6M3F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 74first strand
Strand 2
B
79 83anti-parallel
Strand 3
B
88 96anti-parallel
Strand 4
B
189 197anti-parallel
Strand 5
B
225 233anti-parallel
Strand 6
B
239 247anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 138first strand
Strand 2
B
161 164anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
201 202first strand
Strand 2
B
208 215anti-parallel
Strand 3
C
208 215anti-parallel
Strand 4
C
201 202anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
220 221first strand
Strand 2
B
208 215anti-parallel
Strand 3
C
208 215anti-parallel
Strand 4
C
220 221anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
72 74first strand
Strand 2
C
79 83anti-parallel
Strand 3
C
88 96anti-parallel
Strand 4
C
189 197anti-parallel
Strand 5
C
225 233anti-parallel
Strand 6
C
239 247anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
135 138first strand
Strand 2
C
161 164anti-parallel
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