Analysis of interatomic Contacts of Structural Units in PDB entry:
6M3H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6M3H entry

There is 1 chain in PDB entry 6M3H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 36ALA 345
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6M3H. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
36 46Right-handed alpha
Helix 2
AA2
A
50 64Right-handed alpha
Helix 3
AA3
A
67 71Right-handed 310
Helix 4
AA4
A
72 77Right-handed alpha
Helix 5
AA5
A
82 89Right-handed alpha
Helix 6
AA6
A
90 94Right-handed 310
Helix 7
AA7
A
160 174Right-handed alpha
Helix 8
AA8
A
178 200Right-handed alpha
Helix 9
AA9
A
207 216Right-handed alpha
Helix 10
AB1
A
244 258Right-handed alpha
Helix 11
AB2
A
260 284Right-handed alpha
Helix 12
AB3
A
287 301Right-handed alpha
Helix 13
AB4
A
302 304Right-handed 310
Helix 14
AB5
A
305 320Right-handed alpha
Helix 15
AB6
A
322 335Right-handed alpha
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There are 2 sheets in PDB entry 6M3H. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
79 80first strand
Strand 2
A
115 120anti-parallel
Strand 3
A
127 132anti-parallel
Strand 4
A
142 147anti-parallel
Strand 5
A
155 156anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
217 219first strand
Strand 2
A
227 228anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il