Analysis of interatomic Contacts of Structural Units in PDB entry:
6M3R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6M3R entry

There are 2 chains in PDB entry 6M3R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 PHE 968ALA 1425
F
 TYR 1590ASP 1896
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6M3R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
E
1082 1087Right-handed alpha
Helix 2
AA2
E
1097 1105Right-handed alpha
Helix 3
AA3
E
1169 1174Right-handed alpha
Helix 4
AA4
E
1278 1289Right-handed alpha
Helix 5
AA5
E
1323 1329Right-handed alpha
Helix 6
AA6
F
1591 1608Right-handed alpha
Helix 7
AA7
F
1615 1635Right-handed alpha
Helix 8
AA8
F
1639 1649Right-handed alpha
Helix 9
AA9
F
1665 1715Right-handed alpha
Helix 10
AB1
F
1721 1761Right-handed alpha
Helix 11
AB2
F
1764 1820Right-handed alpha
Helix 12
AB3
F
1821 1825Right-handed 310
Helix 13
AB4
F
1836 1866Right-handed alpha
Helix 14
AB5
F
1870 1896Right-handed alpha
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There are 7 sheets in PDB entry 6M3R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
971 974first strand
Strand 2
E
1002 1009anti-parallel
Strand 3
E
1030 1033anti-parallel
Strand 4
E
1117 1124anti-parallel
Strand 5
E
1025 1026anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
971 974first strand
Strand 2
E
1002 1009anti-parallel
Strand 3
E
1030 1033anti-parallel
Strand 4
E
1117 1124anti-parallel
Strand 5
E
1059 1066anti-parallel
Strand 6
E
1073 1074anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
979 982first strand
Strand 2
E
990 993anti-parallel
Strand 3
E
1039 1049anti-parallel
Strand 4
E
1106 1113anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1126 1129first strand
Strand 2
E
1161 1166anti-parallel
Strand 3
E
1186 1189anti-parallel
Strand 4
E
1265 1270anti-parallel
Strand 5
E
1225 1230anti-parallel
Strand 6
E
1241 1242anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1195 1205first strand
Strand 2
E
1255 1262anti-parallel
Strand 3
E
1250 1252anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1311 1316first strand
Strand 2
E
1292 1301anti-parallel
Strand 3
E
1332 1343anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1367 1369first strand
Strand 2
E
1347 1353anti-parallel
Strand 3
E
1393 1398anti-parallel
Strand 4
E
1413 1417anti-parallel
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