Analysis of interatomic Contacts of Structural Units in PDB entry:
6M3W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6M3W entry

There are 3 chains in PDB entry 6M3W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 688SER 1178
B
 ALA 688SER 1178
C
 ALA 688SER 1178
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6M3W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
719 724Right-handed alpha
Helix 2
AA2
A
728 736Right-handed alpha
Helix 3
AA3
A
740 753Right-handed alpha
Helix 4
AA4
A
902 1014Right-handed alpha
Helix 5
AA5
A
1129 1137Right-handed alpha
Helix 6
AA6
A
1149 1154Right-handed alpha
Helix 7
AA7
A
1162 1178Right-handed alpha
Helix 8
AA8
B
719 724Right-handed alpha
Helix 9
AA9
B
728 736Right-handed alpha
Helix 10
AB1
B
740 753Right-handed alpha
Helix 11
AB2
B
902 1014Right-handed alpha
Helix 12
AB3
B
1129 1137Right-handed alpha
Helix 13
AB4
B
1149 1154Right-handed alpha
Helix 14
AB5
B
1162 1178Right-handed alpha
Helix 15
AB6
C
719 724Right-handed alpha
Helix 16
AB7
C
728 736Right-handed alpha
Helix 17
AB8
C
740 753Right-handed alpha
Helix 18
AB9
C
902 1014Right-handed alpha
Helix 19
AC1
C
1129 1137Right-handed alpha
Helix 20
AC2
C
1149 1154Right-handed alpha
Helix 21
AC3
C
1162 1178Right-handed alpha
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There are 12 sheets in PDB entry 6M3W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
692 704first strand
Strand 2
A
1041 1059anti-parallel
Strand 3
A
708 710anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
692 704first strand
Strand 2
A
1041 1059anti-parallel
Strand 3
A
1029 1037anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1071 1072first strand
Strand 2
A
1102 1103anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1077 1078first strand
Strand 2
A
1085 1086anti-parallel
Strand 3
A
1095 1096anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
692 704first strand
Strand 2
B
1041 1059anti-parallel
Strand 3
B
708 710anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
692 704first strand
Strand 2
B
1041 1059anti-parallel
Strand 3
B
1029 1037anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1071 1072first strand
Strand 2
B
1102 1103anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1077 1078first strand
Strand 2
B
1085 1086anti-parallel
Strand 3
B
1095 1096anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
692 704first strand
Strand 2
C
1041 1059anti-parallel
Strand 3
C
708 710anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
692 704first strand
Strand 2
C
1041 1059anti-parallel
Strand 3
C
1029 1037anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1071 1072first strand
Strand 2
C
1102 1103anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1077 1078first strand
Strand 2
C
1085 1086anti-parallel
Strand 3
C
1095 1096anti-parallel
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