Analysis of interatomic Contacts of Structural Units in PDB entry:
6M3Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6M3Y entry

There is 1 chain in PDB entry 6M3Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 36LEU 857
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6M3Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 40Right-handed 310
Helix 2
AA2
A
145 149Right-handed 310
Helix 3
AA3
A
157 175Right-handed alpha
Helix 4
AA4
A
177 179Right-handed 310
Helix 5
AA5
A
195 198Right-handed 310
Helix 6
AA6
A
210 221Right-handed alpha
Helix 7
AA7
A
230 244Right-handed alpha
Helix 8
AA8
A
310 324Right-handed alpha
Helix 9
AA9
A
343 355Right-handed alpha
Helix 10
AB1
A
357 359Right-handed 310
Helix 11
AB2
A
366 385Right-handed alpha
Helix 12
AB3
A
542 544Right-handed 310
Helix 13
AB4
A
613 619Right-handed alpha
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There are 15 sheets in PDB entry 6M3Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 46first strand
Strand 2
A
49 52anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 82first strand
Strand 2
A
55 58parallel
Strand 3
A
64 67anti-parallel
Strand 4
A
490 491anti-parallel
Strand 5
A
467 468anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 76first strand
Strand 2
A
70 71anti-parallel
Strand 3
A
94 96parallel
Strand 4
A
104 112anti-parallel
Strand 5
A
118 126anti-parallel
Strand 6
A
445 454anti-parallel
Strand 7
A
401 403anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 76first strand
Strand 2
A
70 71anti-parallel
Strand 3
A
94 96parallel
Strand 4
A
104 112anti-parallel
Strand 5
A
118 126anti-parallel
Strand 6
A
445 454anti-parallel
Strand 7
A
409 412anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 207first strand
Strand 2
A
181 188anti-parallel
Strand 3
A
136 143parallel
Strand 4
A
250 257parallel
Strand 5
A
327 333parallel
Strand 6
A
361 364parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 273first strand
Strand 2
A
276 287anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
294 300first strand
Strand 2
A
306 309anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
425 429first strand
Strand 2
A
432 440anti-parallel
Strand 3
A
388 396anti-parallel
Strand 4
A
474 476anti-parallel
Strand 5
A
484 485anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
546 552first strand
Strand 2
A
495 505anti-parallel
Strand 3
A
590 597parallel
Strand 4
A
578 585anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
535 540first strand
Strand 2
A
515 522anti-parallel
Strand 3
A
563 567anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
647 648first strand
Strand 2
A
599 606anti-parallel
Strand 3
A
722 729parallel
Strand 4
A
709 716anti-parallel
Strand 5
A
700 706anti-parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
635 640first strand
Strand 2
A
621 627anti-parallel
Strand 3
A
652 660anti-parallel
Strand 4
A
671 676anti-parallel
Strand 5
A
682 687anti-parallel
Strand 6
A
690 696anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
775 776first strand
Strand 2
A
734 742anti-parallel
Strand 3
A
781 782anti-parallel
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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
775 776first strand
Strand 2
A
734 742anti-parallel
Strand 3
A
842 848parallel
Strand 4
A
834 839anti-parallel
Strand 5
A
830 831anti-parallel
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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
764 767first strand
Strand 2
A
753 758anti-parallel
Strand 3
A
786 793anti-parallel
Strand 4
A
805 809anti-parallel
Strand 5
A
816 820anti-parallel
Strand 6
A
823 825anti-parallel
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