Analysis of interatomic Contacts of Structural Units in PDB entry:
6M4S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6M4S entry

There is 1 chain in PDB entry 6M4S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 4ARG 410
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6M4S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 26Right-handed alpha
Helix 2
AA2
A
45 55Right-handed alpha
Helix 3
AA3
A
84 86Right-handed 310
Helix 4
AA4
A
87 93Right-handed alpha
Helix 5
AA5
A
94 98Right-handed 310
Helix 6
AA6
A
99 114Right-handed alpha
Helix 7
AA7
A
115 136Right-handed alpha
Helix 8
AA8
A
145 149Right-handed alpha
Helix 9
AA9
A
151 163Right-handed alpha
Helix 10
AB1
A
165 167Right-handed 310
Helix 11
AB2
A
168 182Right-handed alpha
Helix 12
AB3
A
187 208Right-handed alpha
Helix 13
AB4
A
212 220Right-handed alpha
Helix 14
AB5
A
229 245Right-handed alpha
Helix 15
AB6
A
245 262Right-handed alpha
Helix 16
AB7
A
262 272Right-handed alpha
Helix 17
AB8
A
275 288Right-handed alpha
Helix 18
AB9
A
318 324Right-handed alpha
Helix 19
AC1
A
353 357Right-handed 310
Helix 20
AC2
A
360 379Right-handed alpha
Helix 21
AC3
A
387 391Right-handed 310
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There are 3 sheets in PDB entry 6M4S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 6first strand
Strand 2
A
28 32parallel
Strand 3
A
40 43anti-parallel
Strand 4
A
314 317parallel
Strand 5
A
296 298anti-parallel
Strand 6
A
58 59anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 144first strand
Strand 2
A
406 408anti-parallel
Strand 3
A
383 384anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 304first strand
Strand 2
A
307 309anti-parallel
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