Analysis of interatomic Contacts of Structural Units in PDB entry:
6M5E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6M5E entry

There are 3 chains in PDB entry 6M5E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2ALA 582
B
 ALA 2ALA 582
C
 ALA 2GLU 100
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 94 helices in PDB entry 6M5E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 31Right-handed alpha
Helix 2
AA2
A
35 56Right-handed alpha
Helix 3
AA3
A
65 79Right-handed alpha
Helix 4
AA4
A
85 91Right-handed alpha
Helix 5
AA5
A
96 103Right-handed alpha
Helix 6
AA6
A
104 106Right-handed 310
Helix 7
AA7
A
119 130Right-handed alpha
Helix 8
AA8
A
130 146Right-handed alpha
Helix 9
AA9
A
150 169Right-handed alpha
Helix 10
AB1
A
173 207Right-handed alpha
Helix 11
AB2
A
207 223Right-handed alpha
Helix 12
AB3
A
227 247Right-handed alpha
Helix 13
AB4
A
249 267Right-handed alpha
Helix 14
AB5
A
277 281Right-handed 310
Helix 15
AB6
A
282 292Right-handed alpha
Helix 16
AB7
A
305 310Right-handed alpha
Helix 17
AB8
A
314 322Right-handed alpha
Helix 18
AB9
A
322 337Right-handed alpha
Helix 19
AC1
A
342 361Right-handed alpha
Helix 20
AC2
A
365 371Right-handed alpha
Helix 21
AC3
A
372 375Right-handed 310
Helix 22
AC4
A
376 415Right-handed alpha
Helix 23
AC5
A
419 432Right-handed alpha
Helix 24
AC6
A
432 438Right-handed alpha
Helix 25
AC7
A
441 467Right-handed alpha
Helix 26
AC8
A
470 479Right-handed alpha
Helix 27
AC9
A
483 491Right-handed alpha
Helix 28
AD1
A
510 516Right-handed 310
Helix 29
AD2
A
517 536Right-handed alpha
Helix 30
AD3
A
540 560Right-handed alpha
Helix 31
AD4
A
565 582Right-handed alpha
Helix 32
AD5
B
5 15Right-handed alpha
Helix 33
AD6
B
15 31Right-handed alpha
Helix 34
AD7
B
35 56Right-handed alpha
Helix 35
AD8
B
65 79Right-handed alpha
Helix 36
AD9
B
87 92Right-handed alpha
Helix 37
AE1
B
96 103Right-handed alpha
Helix 38
AE2
B
104 106Right-handed 310
Helix 39
AE3
B
119 130Right-handed alpha
Helix 40
AE4
B
130 146Right-handed alpha
Helix 41
AE5
B
150 169Right-handed alpha
Helix 42
AE6
B
173 207Right-handed alpha
Helix 43
AE7
B
207 223Right-handed alpha
Helix 44
AE8
B
227 247Right-handed alpha
Helix 45
AE9
B
249 267Right-handed alpha
Helix 46
AF1
B
268 271Right-handed 310
Helix 47
AF2
B
275 280Right-handed alpha
Helix 48
AF3
B
282 292Right-handed alpha
Helix 49
AF4
B
305 310Right-handed alpha
Helix 50
AF5
B
314 322Right-handed alpha
Helix 51
AF6
B
322 337Right-handed alpha
Helix 52
AF7
B
342 362Right-handed alpha
Helix 53
AF8
B
365 371Right-handed alpha
Helix 54
AF9
B
372 415Right-handed alpha
Helix 55
AG1
B
419 438Right-handed alpha
Helix 56
AG2
B
441 467Right-handed alpha
Helix 57
AG3
B
470 479Right-handed alpha
Helix 58
AG4
B
483 491Right-handed alpha
Helix 59
AG5
B
511 516Right-handed 310
Helix 60
AG6
B
517 536Right-handed alpha
Helix 61
AG7
B
540 557Right-handed alpha
Helix 62
AG8
B
566 582Right-handed alpha
Helix 63
AG9
C
5 15Right-handed alpha
Helix 64
AH1
C
15 31Right-handed alpha
Helix 65
AH2
C
35 56Right-handed alpha
Helix 66
AH3
C
65 80Right-handed alpha
Helix 67
AH4
C
85 92Right-handed alpha
Helix 68
AH5
C
96 103Right-handed alpha
Helix 69
AH6
C
104 106Right-handed 310
Helix 70
AH7
C
119 130Right-handed alpha
Helix 71
AH8
C
130 146Right-handed alpha
Helix 72
AH9
C
150 169Right-handed alpha
Helix 73
AI1
C
173 207Right-handed alpha
Helix 74
AI2
C
207 223Right-handed alpha
Helix 75
AI3
C
227 247Right-handed alpha
Helix 76
AI4
C
249 267Right-handed alpha
Helix 77
AI5
C
268 271Right-handed 310
Helix 78
AI6
C
277 281Right-handed 310
Helix 79
AI7
C
282 292Right-handed alpha
Helix 80
AI8
C
305 310Right-handed alpha
Helix 81
AI9
C
314 322Right-handed alpha
Helix 82
AJ1
C
322 338Right-handed alpha
Helix 83
AJ2
C
342 362Right-handed alpha
Helix 84
AJ3
C
365 371Right-handed alpha
Helix 85
AJ4
C
372 415Right-handed alpha
Helix 86
AJ5
C
419 431Right-handed alpha
Helix 87
AJ6
C
432 438Right-handed alpha
Helix 88
AJ7
C
441 467Right-handed alpha
Helix 89
AJ8
C
470 479Right-handed alpha
Helix 90
AJ9
C
483 491Right-handed alpha
Helix 91
AK1
C
510 514Right-handed 310
Helix 92
AK2
C
517 536Right-handed alpha
Helix 93
AK3
C
540 560Right-handed alpha
Helix 94
AK4
C
565 582Right-handed alpha
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There are no sheets in PDB entry 6M5E
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