Analysis of interatomic Contacts of Structural Units in PDB entry:
6M5N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6M5N entry

There is 1 chain in PDB entry 6M5N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2ARG 260
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6M5N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 29Right-handed alpha
Helix 2
AA2
A
39 54Right-handed alpha
Helix 3
AA3
A
68 84Right-handed alpha
Helix 4
AA4
A
105 117Right-handed alpha
Helix 5
AA5
A
117 133Right-handed alpha
Helix 6
AA6
A
144 148Right-handed 310
Helix 7
AA7
A
154 176Right-handed alpha
Helix 8
AA8
A
191 201Right-handed alpha
Helix 9
AA9
A
202 217Right-handed alpha
Helix 10
AB1
A
225 230Right-handed alpha
Helix 11
AB2
A
230 239Right-handed alpha
Helix 12
AB3
A
240 243Right-handed 310
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There is 1 sheet (AA1) in PDB entry 6M5N.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 63first strand
Strand 2
A
32 37parallel
Strand 3
A
8 12parallel
Strand 4
A
88 91parallel
Strand 5
A
137 142parallel
Strand 6
A
180 187parallel
Strand 7
A
249 252parallel
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