Analysis of interatomic Contacts of Structural Units in PDB entry:
6M5T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6M5T entry

There is 1 chain in PDB entry 6M5T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 476PHE 728
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 6M5T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
479 489Right-handed alpha
Helix 2
AA2
A
495 500Right-handed 310
Helix 3
AA3
A
549 569Right-handed alpha
Helix 4
AA4
A
585 607Right-handed alpha
Helix 5
AA5
A
639 652Right-handed alpha
Helix 6
AA6
A
672 682Right-handed alpha
Helix 7
AA7
A
706 720Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6M5T.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
618 619first strand
Strand 2
A
575 580parallel
Strand 3
A
503 509parallel
Strand 4
A
522 528anti-parallel
Strand 5
A
533 538anti-parallel
Strand 6
A
657 663parallel
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