Analysis of interatomic Contacts of Structural Units in PDB entry:
6M5W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6M5W entry

There is 1 chain in PDB entry 6M5W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 11LEU 480
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6M5W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 24Right-handed alpha
Helix 2
AA2
A
25 30Right-handed alpha
Helix 3
AA3
A
30 46Right-handed alpha
Helix 4
AA4
A
58 66Right-handed alpha
Helix 5
AA5
A
67 71Right-handed 310
Helix 6
AA6
A
87 104Right-handed alpha
Helix 7
AA7
A
119 132Right-handed alpha
Helix 8
AA8
A
148 152Right-handed 310
Helix 9
AA9
A
161 167Right-handed alpha
Helix 10
AB1
A
182 194Right-handed alpha
Helix 11
AB2
A
210 222Right-handed alpha
Helix 12
AB3
A
232 239Right-handed alpha
Helix 13
AB4
A
243 247Right-handed 310
Helix 14
AB5
A
256 260Right-handed 310
Helix 15
AB6
A
287 297Right-handed alpha
Helix 16
AB7
A
305 320Right-handed alpha
Helix 17
AB8
A
321 345Right-handed alpha
Helix 18
AB9
A
364 366Right-handed 310
Helix 19
AC1
A
369 380Right-handed alpha
Helix 20
AC2
A
405 410Right-handed alpha
Helix 21
AC3
A
414 440Right-handed alpha
Helix 22
AC4
A
444 454Right-handed alpha
Helix 23
AC5
A
454 473Right-handed alpha
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There are 5 sheets in PDB entry 6M5W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 49first strand
Strand 2
A
382 383parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 77first strand
Strand 2
A
80 81anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 114first strand
Strand 2
A
265 270anti-parallel
Strand 3
A
250 254anti-parallel
Strand 4
A
224 228parallel
Strand 5
A
197 201parallel
Strand 6
A
137 139parallel
Strand 7
A
168 169parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 273first strand
Strand 2
A
285 286anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 349first strand
Strand 2
A
358 362anti-parallel
Strand 3
A
400 404anti-parallel
Strand 4
A
385 387anti-parallel
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