Analysis of interatomic Contacts of Structural Units in PDB entry:
6M5Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6M5Y entry

There is 1 chain in PDB entry 6M5Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 3ASP 272
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 6M5Y. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
239 241Right-handed 310
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There are 3 sheets in PDB entry 6M5Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 69first strand
Strand 2
A
55 65anti-parallel
Strand 3
A
41 52anti-parallel
Strand 4
A
31 38anti-parallel
Strand 5
A
120 125anti-parallel
Strand 6
A
6 8anti-parallel
Strand 7
A
143 145anti-parallel
Strand 8
A
257 262anti-parallel
Strand 9
A
168 175anti-parallel
Strand 10
A
178 189anti-parallel
Strand 11
A
192 202anti-parallel
Strand 12
A
205 206anti-parallel
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There are 12 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 74first strand
Strand 2
A
55 65anti-parallel
Strand 3
A
41 52anti-parallel
Strand 4
A
31 38anti-parallel
Strand 5
A
120 125anti-parallel
Strand 6
A
6 8anti-parallel
Strand 7
A
143 145anti-parallel
Strand 8
A
257 262anti-parallel
Strand 9
A
168 175anti-parallel
Strand 10
A
178 189anti-parallel
Strand 11
A
192 202anti-parallel
Strand 12
A
210 211anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 110first strand
Strand 2
A
96 100anti-parallel
Strand 3
A
84 91anti-parallel
Strand 4
A
17 24anti-parallel
Strand 5
A
127 134anti-parallel
Strand 6
A
264 271anti-parallel
Strand 7
A
154 161anti-parallel
Strand 8
A
222 228anti-parallel
Strand 9
A
233 237anti-parallel
Strand 10
A
243 247anti-parallel
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