Analysis of interatomic Contacts of Structural Units in PDB entry:
6M66

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6M66 entry

There are 7 chains in PDB entry 6M66 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 35	GLU 336
B	ASP 35	GLU 336
C	ASP 35	GLU 336
D	ASP 35	GLU 336
E	ASP 35	GLU 336
F	ASP 35	GLU 336
G	ASP 35	GLU 336

There are105 helices in PDB entry 6M66. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	35	59	Right-handed alpha
Helix 2	AA2	A	74	87	Right-handed alpha
Helix 3	AA3	A	103	107	Right-handed 310
Helix 4	AA4	A	108	131	Right-handed alpha
Helix 5	AA5	A	131	157	Right-handed alpha
Helix 6	AA6	A	195	197	Right-handed 310
Helix 7	AA7	A	198	203	Right-handed alpha
Helix 8	AA8	A	209	238	Right-handed alpha
Helix 9	AA9	A	248	256	Right-handed alpha
Helix 10	AB1	A	269	275	Right-handed alpha
Helix 11	AB2	A	276	286	Right-handed alpha
Helix 12	AB3	A	287	295	Right-handed alpha
Helix 13	AB4	A	307	310	Right-handed 310
Helix 14	AB5	A	311	321	Right-handed alpha
Helix 15	AB6	A	329	336	Right-handed alpha
Helix 16	AB7	B	36	59	Right-handed alpha
Helix 17	AB8	B	74	87	Right-handed alpha
Helix 18	AB9	B	103	107	Right-handed 310
Helix 19	AC1	B	108	131	Right-handed alpha
Helix 20	AC2	B	131	157	Right-handed alpha
Helix 21	AC3	B	195	197	Right-handed 310
Helix 22	AC4	B	198	203	Right-handed alpha
Helix 23	AC5	B	209	238	Right-handed alpha
Helix 24	AC6	B	248	256	Right-handed alpha
Helix 25	AC7	B	269	275	Right-handed alpha
Helix 26	AC8	B	276	286	Right-handed alpha
Helix 27	AC9	B	287	295	Right-handed alpha
Helix 28	AD1	B	307	310	Right-handed 310
Helix 29	AD2	B	311	321	Right-handed alpha
Helix 30	AD3	B	329	336	Right-handed alpha
Helix 31	AD4	C	36	59	Right-handed alpha
Helix 32	AD5	C	74	87	Right-handed alpha
Helix 33	AD6	C	103	107	Right-handed 310
Helix 34	AD7	C	108	131	Right-handed alpha
Helix 35	AD8	C	131	157	Right-handed alpha
Helix 36	AD9	C	195	197	Right-handed 310
Helix 37	AE1	C	198	203	Right-handed alpha
Helix 38	AE2	C	209	238	Right-handed alpha
Helix 39	AE3	C	248	256	Right-handed alpha
Helix 40	AE4	C	269	275	Right-handed alpha
Helix 41	AE5	C	276	286	Right-handed alpha
Helix 42	AE6	C	287	295	Right-handed alpha
Helix 43	AE7	C	307	310	Right-handed 310
Helix 44	AE8	C	311	321	Right-handed alpha
Helix 45	AE9	C	329	336	Right-handed alpha
Helix 46	AF1	D	36	59	Right-handed alpha
Helix 47	AF2	D	74	87	Right-handed alpha
Helix 48	AF3	D	103	107	Right-handed 310
Helix 49	AF4	D	108	131	Right-handed alpha
Helix 50	AF5	D	131	157	Right-handed alpha
Helix 51	AF6	D	195	197	Right-handed 310
Helix 52	AF7	D	198	203	Right-handed alpha
Helix 53	AF8	D	209	238	Right-handed alpha
Helix 54	AF9	D	248	256	Right-handed alpha
Helix 55	AG1	D	269	275	Right-handed alpha
Helix 56	AG2	D	276	286	Right-handed alpha
Helix 57	AG3	D	287	295	Right-handed alpha
Helix 58	AG4	D	307	310	Right-handed 310
Helix 59	AG5	D	311	321	Right-handed alpha
Helix 60	AG6	D	329	336	Right-handed alpha
Helix 61	AG7	E	36	59	Right-handed alpha
Helix 62	AG8	E	74	87	Right-handed alpha
Helix 63	AG9	E	103	107	Right-handed 310
Helix 64	AH1	E	108	131	Right-handed alpha
Helix 65	AH2	E	131	157	Right-handed alpha
Helix 66	AH3	E	195	197	Right-handed 310
Helix 67	AH4	E	198	203	Right-handed alpha
Helix 68	AH5	E	209	238	Right-handed alpha
Helix 69	AH6	E	248	256	Right-handed alpha
Helix 70	AH7	E	269	275	Right-handed alpha
Helix 71	AH8	E	276	286	Right-handed alpha
Helix 72	AH9	E	287	295	Right-handed alpha
Helix 73	AI1	E	307	310	Right-handed 310
Helix 74	AI2	E	311	321	Right-handed alpha
Helix 75	AI3	E	329	336	Right-handed alpha
Helix 76	AI4	F	36	59	Right-handed alpha
Helix 77	AI5	F	74	87	Right-handed alpha
Helix 78	AI6	F	103	107	Right-handed 310
Helix 79	AI7	F	108	131	Right-handed alpha
Helix 80	AI8	F	131	157	Right-handed alpha
Helix 81	AI9	F	195	197	Right-handed 310
Helix 82	AJ1	F	198	203	Right-handed alpha
Helix 83	AJ2	F	209	238	Right-handed alpha
Helix 84	AJ3	F	248	256	Right-handed alpha
Helix 85	AJ4	F	269	275	Right-handed alpha
Helix 86	AJ5	F	276	286	Right-handed alpha
Helix 87	AJ6	F	287	295	Right-handed alpha
Helix 88	AJ7	F	307	310	Right-handed 310
Helix 89	AJ8	F	311	321	Right-handed alpha
Helix 90	AJ9	F	329	336	Right-handed alpha
Helix 91	AK1	G	36	59	Right-handed alpha
Helix 92	AK2	G	74	87	Right-handed alpha
Helix 93	AK3	G	103	107	Right-handed 310
Helix 94	AK4	G	108	131	Right-handed alpha
Helix 95	AK5	G	131	157	Right-handed alpha
Helix 96	AK6	G	195	197	Right-handed 310
Helix 97	AK7	G	198	203	Right-handed alpha
Helix 98	AK8	G	209	238	Right-handed alpha
Helix 99	AK9	G	248	256	Right-handed alpha
Helix 100	AL1	G	269	275	Right-handed alpha
Helix 101	AL2	G	276	286	Right-handed alpha
Helix 102	AL3	G	287	295	Right-handed alpha
Helix 103	AL4	G	307	310	Right-handed 310
Helix 104	AL5	G	311	321	Right-handed alpha
Helix 105	AL6	G	329	336	Right-handed alpha

There are 7 sheets in PDB entry 6M66. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	64	65	first strand
Strand 2	A	266	267	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	64	65	first strand
Strand 2	B	266	267	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	64	65	first strand
Strand 2	C	266	267	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	64	65	first strand
Strand 2	D	266	267	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	64	65	first strand
Strand 2	E	266	267	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	64	65	first strand
Strand 2	F	266	267	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	64	65	first strand
Strand 2	G	266	267	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6M66

Analysis of interatomic Contacts of Structural Units in PDB entry:
6M66