Analysis of interatomic Contacts of Structural Units in PDB entry:
6M67

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6M67 entry

There are 7 chains in PDB entry 6M67 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 35	GLU 336
B	ASP 35	GLU 336
C	ASP 35	GLU 336
D	ASP 35	GLU 336
E	ASP 35	GLU 336
F	ASP 35	GLU 336
G	ASP 35	GLU 336

There are126 helices in PDB entry 6M67. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	35	59	Right-handed alpha
Helix 2	AA2	A	74	87	Right-handed alpha
Helix 3	AA3	A	103	107	Right-handed 310
Helix 4	AA4	A	108	131	Right-handed alpha
Helix 5	AA5	A	131	156	Right-handed alpha
Helix 6	AA6	A	195	197	Right-handed 310
Helix 7	AA7	A	198	203	Right-handed alpha
Helix 8	AA8	A	207	209	Right-handed 310
Helix 9	AA9	A	210	238	Right-handed alpha
Helix 10	AB1	A	248	256	Right-handed alpha
Helix 11	AB2	A	269	274	Right-handed alpha
Helix 12	AB3	A	275	277	Right-handed 310
Helix 13	AB4	A	278	286	Right-handed alpha
Helix 14	AB5	A	287	293	Right-handed alpha
Helix 15	AB6	A	294	300	Right-handed 310
Helix 16	AB7	A	311	316	Right-handed alpha
Helix 17	AB8	A	317	320	Right-handed 310
Helix 18	AB9	A	329	336	Right-handed alpha
Helix 19	AC1	B	36	59	Right-handed alpha
Helix 20	AC2	B	74	87	Right-handed alpha
Helix 21	AC3	B	103	107	Right-handed 310
Helix 22	AC4	B	108	131	Right-handed alpha
Helix 23	AC5	B	131	156	Right-handed alpha
Helix 24	AC6	B	195	197	Right-handed 310
Helix 25	AC7	B	198	203	Right-handed alpha
Helix 26	AC8	B	207	209	Right-handed 310
Helix 27	AC9	B	210	238	Right-handed alpha
Helix 28	AD1	B	248	256	Right-handed alpha
Helix 29	AD2	B	269	274	Right-handed alpha
Helix 30	AD3	B	275	277	Right-handed 310
Helix 31	AD4	B	278	286	Right-handed alpha
Helix 32	AD5	B	287	293	Right-handed alpha
Helix 33	AD6	B	294	300	Right-handed 310
Helix 34	AD7	B	311	316	Right-handed alpha
Helix 35	AD8	B	317	320	Right-handed 310
Helix 36	AD9	B	329	336	Right-handed alpha
Helix 37	AE1	C	36	59	Right-handed alpha
Helix 38	AE2	C	74	87	Right-handed alpha
Helix 39	AE3	C	103	107	Right-handed 310
Helix 40	AE4	C	108	131	Right-handed alpha
Helix 41	AE5	C	131	156	Right-handed alpha
Helix 42	AE6	C	195	197	Right-handed 310
Helix 43	AE7	C	198	203	Right-handed alpha
Helix 44	AE8	C	207	209	Right-handed 310
Helix 45	AE9	C	210	238	Right-handed alpha
Helix 46	AF1	C	248	256	Right-handed alpha
Helix 47	AF2	C	269	274	Right-handed alpha
Helix 48	AF3	C	275	277	Right-handed 310
Helix 49	AF4	C	278	286	Right-handed alpha
Helix 50	AF5	C	287	293	Right-handed alpha
Helix 51	AF6	C	294	300	Right-handed 310
Helix 52	AF7	C	311	316	Right-handed alpha
Helix 53	AF8	C	317	320	Right-handed 310
Helix 54	AF9	C	329	336	Right-handed alpha
Helix 55	AG1	D	36	59	Right-handed alpha
Helix 56	AG2	D	74	87	Right-handed alpha
Helix 57	AG3	D	103	107	Right-handed 310
Helix 58	AG4	D	108	131	Right-handed alpha
Helix 59	AG5	D	131	156	Right-handed alpha
Helix 60	AG6	D	195	197	Right-handed 310
Helix 61	AG7	D	198	203	Right-handed alpha
Helix 62	AG8	D	207	209	Right-handed 310
Helix 63	AG9	D	210	238	Right-handed alpha
Helix 64	AH1	D	248	256	Right-handed alpha
Helix 65	AH2	D	269	274	Right-handed alpha
Helix 66	AH3	D	275	277	Right-handed 310
Helix 67	AH4	D	278	286	Right-handed alpha
Helix 68	AH5	D	287	293	Right-handed alpha
Helix 69	AH6	D	294	300	Right-handed 310
Helix 70	AH7	D	311	316	Right-handed alpha
Helix 71	AH8	D	317	320	Right-handed 310
Helix 72	AH9	D	329	336	Right-handed alpha
Helix 73	AI1	E	36	59	Right-handed alpha
Helix 74	AI2	E	74	87	Right-handed alpha
Helix 75	AI3	E	103	107	Right-handed 310
Helix 76	AI4	E	108	131	Right-handed alpha
Helix 77	AI5	E	131	156	Right-handed alpha
Helix 78	AI6	E	195	197	Right-handed 310
Helix 79	AI7	E	198	203	Right-handed alpha
Helix 80	AI8	E	207	209	Right-handed 310
Helix 81	AI9	E	210	238	Right-handed alpha
Helix 82	AJ1	E	248	256	Right-handed alpha
Helix 83	AJ2	E	269	274	Right-handed alpha
Helix 84	AJ3	E	275	277	Right-handed 310
Helix 85	AJ4	E	278	286	Right-handed alpha
Helix 86	AJ5	E	287	293	Right-handed alpha
Helix 87	AJ6	E	294	300	Right-handed 310
Helix 88	AJ7	E	311	316	Right-handed alpha
Helix 89	AJ8	E	317	320	Right-handed 310
Helix 90	AJ9	E	329	336	Right-handed alpha
Helix 91	AK1	F	36	59	Right-handed alpha
Helix 92	AK2	F	74	87	Right-handed alpha
Helix 93	AK3	F	103	107	Right-handed 310
Helix 94	AK4	F	108	131	Right-handed alpha
Helix 95	AK5	F	131	156	Right-handed alpha
Helix 96	AK6	F	195	197	Right-handed 310
Helix 97	AK7	F	198	203	Right-handed alpha
Helix 98	AK8	F	207	209	Right-handed 310
Helix 99	AK9	F	210	238	Right-handed alpha
Helix 100	AL1	F	248	256	Right-handed alpha
Helix 101	AL2	F	269	274	Right-handed alpha
Helix 102	AL3	F	275	277	Right-handed 310
Helix 103	AL4	F	278	286	Right-handed alpha
Helix 104	AL5	F	287	293	Right-handed alpha
Helix 105	AL6	F	294	300	Right-handed 310
Helix 106	AL7	F	311	316	Right-handed alpha
Helix 107	AL8	F	317	320	Right-handed 310
Helix 108	AL9	F	329	336	Right-handed alpha
Helix 109	AM1	G	36	59	Right-handed alpha
Helix 110	AM2	G	74	87	Right-handed alpha
Helix 111	AM3	G	103	107	Right-handed 310
Helix 112	AM4	G	108	131	Right-handed alpha
Helix 113	AM5	G	131	156	Right-handed alpha
Helix 114	AM6	G	195	197	Right-handed 310
Helix 115	AM7	G	198	203	Right-handed alpha
Helix 116	AM8	G	207	209	Right-handed 310
Helix 117	AM9	G	210	238	Right-handed alpha
Helix 118	AN1	G	248	256	Right-handed alpha
Helix 119	AN2	G	269	274	Right-handed alpha
Helix 120	AN3	G	275	277	Right-handed 310
Helix 121	AN4	G	278	286	Right-handed alpha
Helix 122	AN5	G	287	293	Right-handed alpha
Helix 123	AN6	G	294	300	Right-handed 310
Helix 124	AN7	G	311	316	Right-handed alpha
Helix 125	AN8	G	317	320	Right-handed 310
Helix 126	AN9	G	329	336	Right-handed alpha

There are 7 sheets in PDB entry 6M67. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	64	65	first strand
Strand 2	A	262	267	anti-parallel
Strand 3	A	243	247	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	64	65	first strand
Strand 2	B	262	267	anti-parallel
Strand 3	B	243	247	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	64	65	first strand
Strand 2	C	262	267	anti-parallel
Strand 3	C	243	247	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	64	65	first strand
Strand 2	D	262	267	anti-parallel
Strand 3	D	243	247	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	64	65	first strand
Strand 2	E	262	267	anti-parallel
Strand 3	E	243	247	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	64	65	first strand
Strand 2	F	262	267	anti-parallel
Strand 3	F	243	247	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	64	65	first strand
Strand 2	G	262	267	anti-parallel
Strand 3	G	243	247	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6M67

Analysis of interatomic Contacts of Structural Units in PDB entry:
6M67