Analysis of interatomic Contacts of Structural Units in PDB entry:
6M6A

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6M6A entry

There are 8 chains in PDB entry 6M6A (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 4	GLN 229
B	LYS 7	PRO 228
C	MET 1	LYS 1118
D	LYS 3	ALA 1502
E	ALA 2	VAL 95
M	GLY 322	LYS 825
T	G 1	G 39
N	C 1	C 39

There are125 helices in PDB entry 6M6A. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	31	47	Right-handed alpha
Helix 2	AA2	A	74	84	Right-handed alpha
Helix 3	AA3	A	112	114	Right-handed 310
Helix 4	AA4	A	152	157	Right-handed alpha
Helix 5	AA5	A	206	223	Right-handed alpha
Helix 6	AA6	A	224	227	Right-handed 310
Helix 7	AA7	B	31	47	Right-handed alpha
Helix 8	AA8	B	74	84	Right-handed alpha
Helix 9	AA9	B	112	114	Right-handed 310
Helix 10	AB1	B	152	157	Right-handed alpha
Helix 11	AB2	B	206	224	Right-handed alpha
Helix 12	AB3	C	19	31	Right-handed alpha
Helix 13	AB4	C	43	52	Right-handed alpha
Helix 14	AB5	C	79	86	Right-handed alpha
Helix 15	AB6	C	193	200	Right-handed alpha
Helix 16	AB7	C	203	211	Right-handed alpha
Helix 17	AB8	C	214	222	Right-handed alpha
Helix 18	AB9	C	223	228	Right-handed alpha
Helix 19	AC1	C	230	243	Right-handed alpha
Helix 20	AC2	C	249	261	Right-handed alpha
Helix 21	AC3	C	270	281	Right-handed alpha
Helix 22	AC4	C	302	315	Right-handed alpha
Helix 23	AC5	C	327	329	Right-handed 310
Helix 24	AC6	C	335	359	Right-handed alpha
Helix 25	AC7	C	368	372	Right-handed 310
Helix 26	AC8	C	375	389	Right-handed alpha
Helix 27	AC9	C	399	408	Right-handed alpha
Helix 28	AD1	C	431	435	Right-handed 310
Helix 29	AD2	C	487	492	Right-handed alpha
Helix 30	AD3	C	536	540	Right-handed 310
Helix 31	AD4	C	543	547	Right-handed 310
Helix 32	AD5	C	549	553	Right-handed 310
Helix 33	AD6	C	554	566	Right-handed alpha
Helix 34	AD7	C	583	592	Right-handed alpha
Helix 35	AD8	C	769	779	Right-handed alpha
Helix 36	AD9	C	872	876	Right-handed 310
Helix 37	AE1	C	882	898	Right-handed alpha
Helix 38	AE2	C	910	930	Right-handed alpha
Helix 39	AE3	C	937	950	Right-handed alpha
Helix 40	AE4	C	958	969	Right-handed alpha
Helix 41	AE5	C	1000	1004	Right-handed 310
Helix 42	AE6	C	1034	1044	Right-handed alpha
Helix 43	AE7	C	1045	1054	Right-handed alpha
Helix 44	AE8	C	1059	1073	Right-handed alpha
Helix 45	AE9	C	1082	1095	Right-handed alpha
Helix 46	AF1	D	14	20	Right-handed alpha
Helix 47	AF2	D	46	51	Right-handed alpha
Helix 48	AF3	D	82	88	Right-handed 310
Helix 49	AF4	D	102	107	Right-handed alpha
Helix 50	AF5	D	110	116	Right-handed alpha
Helix 51	AF6	D	119	128	Right-handed alpha
Helix 52	AF7	D	155	164	Right-handed alpha
Helix 53	AF8	D	423	426	Right-handed 310
Helix 54	AF9	D	457	467	Right-handed alpha
Helix 55	AG1	D	469	483	Right-handed alpha
Helix 56	AG2	D	485	506	Right-handed alpha
Helix 57	AG3	D	508	511	Right-handed 310
Helix 58	AG4	D	538	559	Right-handed alpha
Helix 59	AG5	D	563	583	Right-handed alpha
Helix 60	AG6	D	602	608	Right-handed alpha
Helix 61	AG7	D	612	620	Right-handed alpha
Helix 62	AG8	D	645	653	Right-handed alpha
Helix 63	AG9	D	653	664	Right-handed alpha
Helix 64	AH1	D	669	679	Right-handed alpha
Helix 65	AH2	D	680	683	Right-handed 310
Helix 66	AH3	D	685	695	Right-handed alpha
Helix 67	AH4	D	709	713	Right-handed 310
Helix 68	AH5	D	729	733	Right-handed 310
Helix 69	AH6	D	752	762	Right-handed alpha
Helix 70	AH7	D	782	794	Right-handed alpha
Helix 71	AH8	D	808	818	Right-handed alpha
Helix 72	AH9	D	835	841	Right-handed alpha
Helix 73	AI1	D	845	855	Right-handed alpha
Helix 74	AI2	D	876	891	Right-handed alpha
Helix 75	AI3	D	892	900	Right-handed alpha
Helix 76	AI4	D	907	923	Right-handed alpha
Helix 77	AI5	D	924	945	Right-handed alpha
Helix 78	AI6	D	950	954	Right-handed 310
Helix 79	AI7	D	958	980	Right-handed alpha
Helix 80	AI8	D	984	1015	Right-handed alpha
Helix 81	AI9	D	1018	1027	Right-handed alpha
Helix 82	AJ1	D	1031	1039	Right-handed alpha
Helix 83	AJ2	D	1066	1102	Right-handed alpha
Helix 84	AJ3	D	1136	1145	Right-handed alpha
Helix 85	AJ4	D	1167	1181	Right-handed alpha
Helix 86	AJ5	D	1190	1194	Right-handed 310
Helix 87	AJ6	D	1202	1206	Right-handed alpha
Helix 88	AJ7	D	1220	1231	Right-handed alpha
Helix 89	AJ8	D	1232	1236	Right-handed 310
Helix 90	AJ9	D	1255	1263	Right-handed alpha
Helix 91	AK1	D	1331	1340	Right-handed alpha
Helix 92	AK2	D	1341	1360	Right-handed alpha
Helix 93	AK3	D	1365	1376	Right-handed alpha
Helix 94	AK4	D	1397	1411	Right-handed alpha
Helix 95	AK5	D	1423	1430	Right-handed alpha
Helix 96	AK6	D	1433	1441	Right-handed alpha
Helix 97	AK7	D	1442	1454	Right-handed alpha
Helix 98	AK8	D	1462	1469	Right-handed alpha
Helix 99	AK9	D	1474	1477	Right-handed 310
Helix 100	AL1	D	1478	1483	Right-handed alpha
Helix 101	AL2	D	1489	1501	Right-handed alpha
Helix 102	AL3	E	5	11	Right-handed alpha
Helix 103	AL4	E	15	33	Right-handed alpha
Helix 104	AL5	E	59	71	Right-handed alpha
Helix 105	AL6	E	81	93	Right-handed alpha
Helix 106	AL7	M	364	371	Right-handed 310
Helix 107	AL8	M	407	420	Right-handed alpha
Helix 108	AL9	M	430	437	Right-handed alpha
Helix 109	AM1	M	444	460	Right-handed alpha
Helix 110	AM2	M	477	488	Right-handed alpha
Helix 111	AM3	M	489	491	Right-handed 310
Helix 112	AM4	M	500	515	Right-handed alpha
Helix 113	AM5	M	530	543	Right-handed alpha
Helix 114	AM6	M	552	558	Right-handed alpha
Helix 115	AM7	M	572	577	Right-handed alpha
Helix 116	AM8	M	577	587	Right-handed alpha
Helix 117	AM9	M	605	613	Right-handed alpha
Helix 118	AN1	M	636	650	Right-handed alpha
Helix 119	AN2	M	663	675	Right-handed alpha
Helix 120	AN3	M	688	702	Right-handed alpha
Helix 121	AN4	M	729	733	Right-handed 310
Helix 122	AN5	M	734	743	Right-handed alpha
Helix 123	AN6	M	763	775	Right-handed alpha
Helix 124	AN7	M	781	796	Right-handed alpha
Helix 125	AN8	M	812	825	Right-handed alpha

There are 54 sheets in PDB entry 6M6A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	16	first strand
Strand 2	A	20	26	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	96	100	first strand
Strand 2	A	140	148	anti-parallel
Strand 3	A	49	58	anti-parallel
Strand 4	A	165	166	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	103	104	first strand
Strand 2	A	137	138	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	110	first strand
Strand 2	A	128	131	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	150	151	first strand
Strand 2	A	169	170	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	184	first strand
Strand 2	A	192	201	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	10	16	first strand
Strand 2	B	20	28	anti-parallel
Strand 3	B	193	201	anti-parallel
Strand 4	B	174	183	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	96	103	first strand
Strand 2	B	138	148	anti-parallel
Strand 3	B	49	58	anti-parallel
Strand 4	B	165	166	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	89	first strand
Strand 2	B	120	122	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	110	first strand
Strand 2	B	128	131	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	150	151	first strand
Strand 2	B	169	170	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2	5	first strand
Strand 2	C	899	902	parallel
Strand 3	C	579	580	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	65	73	first strand
Strand 2	C	91	101	anti-parallel
Strand 3	C	108	119	anti-parallel
Strand 4	M	360	362	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	127	129	first strand
Strand 2	C	132	136	anti-parallel
Strand 3	C	392	394	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	331	334	first strand
Strand 2	C	138	142	anti-parallel
Strand 3	C	409	411	parallel
Strand 4	C	453	454	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	150	first strand
Strand 2	C	158	163	anti-parallel
Strand 3	C	172	176	anti-parallel
Strand 4	C	182	185	anti-parallel
Strand 5	C	190	192	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	291	294	first strand
Strand 2	C	297	300	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	460	461	first strand
Strand 2	C	467	475	anti-parallel
Strand 3	C	484	486	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	478	479	first strand
Strand 2	C	467	475	anti-parallel
Strand 3	C	531	533	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	495	497	first strand
Strand 2	C	513	517	anti-parallel
Strand 3	C	522	524	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	503	504	first strand
Strand 2	C	507	508	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	595	597	first strand
Strand 2	C	653	657	anti-parallel
Strand 3	C	640	641	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	620	624	first strand
Strand 2	C	610	615	anti-parallel
Strand 3	C	601	607	anti-parallel
Strand 4	C	648	649	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	661	662	first strand
Strand 2	C	665	666	anti-parallel

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There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	670	676	first strand
Strand 2	C	869	871	parallel
Strand 3	C	687	691	anti-parallel
Strand 4	C	846	853	parallel
Strand 5	C	838	841	anti-parallel
Strand 6	C	990	996	anti-parallel
Strand 7	C	670	676	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	702	713	first strand
Strand 2	C	819	831	anti-parallel
Strand 3	C	798	807	anti-parallel
Strand 4	C	748	749	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	754	756	first strand
Strand 2	C	790	791	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	759	761	first strand
Strand 2	C	785	787	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	971	972	first strand
Strand 2	C	987	988	anti-parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1006	1008	first strand
Strand 2	D	626	633	anti-parallel
Strand 3	D	744	748	anti-parallel
Strand 4	D	700	703	anti-parallel
Strand 5	D	715	720	anti-parallel
Strand 6	D	641	644	parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1006	1008	first strand
Strand 2	D	626	633	anti-parallel
Strand 3	D	726	728	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1030	1032	first strand
Strand 2	D	621	623	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1097	1099	first strand
Strand 2	D	8	12	anti-parallel
Strand 3	D	1456	1457	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	22	25	first strand
Strand 2	D	90	93	parallel
Strand 3	D	517	518	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	99	100	first strand
Strand 2	D	513	514	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	152	154	first strand
Strand 2	D	131	136	anti-parallel
Strand 3	D	453	455	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	141	142	first strand
Strand 2	D	145	146	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	166	170	first strand
Strand 2	D	392	396	anti-parallel
Strand 3	D	201	205	anti-parallel
Strand 4	D	183	185	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	398	399	first strand
Strand 2	D	443	448	anti-parallel
Strand 3	D	433	438	anti-parallel
Strand 4	D	414	415	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	420	422	first strand
Strand 2	D	427	428	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	827	829	first strand
Strand 2	D	832	834	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	864	868	first strand
Strand 2	D	871	875	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1106	1109	first strand
Strand 2	D	1199	1201	parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1118	1121	first strand
Strand 2	D	1185	1188	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1123	1125	first strand
Strand 2	D	1132	1134	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1153	1155	first strand
Strand 2	D	1158	1160	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1207	1208	first strand
Strand 2	D	1213	1214	anti-parallel

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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1300	1305	first strand
Strand 2	D	1290	1295	anti-parallel
Strand 3	D	1279	1284	anti-parallel
Strand 4	D	1317	1319	anti-parallel

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There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1394	1396	first strand
Strand 2	D	1378	1383	anti-parallel
Strand 3	D	1416	1419	anti-parallel

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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1485	1487	first strand
Strand 2	E	74	76	anti-parallel

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There are 2 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	47	49	first strand
Strand 2	E	54	56	anti-parallel

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There are 4 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	346	353	first strand
Strand 2	M	332	343	anti-parallel
Strand 3	M	323	326	anti-parallel
Strand 4	M	372	373	anti-parallel

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There are 7 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	522	524	first strand
Strand 2	M	548	550	parallel
Strand 3	M	493	496	parallel
Strand 4	M	565	571	parallel
Strand 5	M	593	596	parallel
Strand 6	M	465	467	parallel
Strand 7	M	614	615	parallel

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There are 5 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	629	633	first strand
Strand 2	M	753	757	parallel
Strand 3	M	722	727	parallel
Strand 4	M	653	657	parallel
Strand 5	M	706	709	parallel

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Analysis of interatomic Contacts of Structural Units in PDB entry: 6M6A

Analysis of interatomic Contacts of Structural Units in PDB entry:
6M6A