Analysis of interatomic Contacts of Structural Units in PDB entry:
6M6Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6M6Q entry

There are 2 chains in PDB entry 6M6Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 4ARG 329
B
 PRO 3SER 335
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 6M6Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 11Right-handed 310
Helix 2
AA2
A
24 30Right-handed alpha
Helix 3
AA3
A
32 43Right-handed alpha
Helix 4
AA4
A
49 59Right-handed 310
Helix 5
AA5
A
62 73Right-handed alpha
Helix 6
AA6
A
77 80Right-handed 310
Helix 7
AA7
A
81 91Right-handed alpha
Helix 8
AA8
A
93 128Right-handed alpha
Helix 9
AA9
A
130 145Right-handed alpha
Helix 10
AB1
A
145 153Right-handed alpha
Helix 11
AB2
A
161 171Right-handed alpha
Helix 12
AB3
A
173 180Right-handed alpha
Helix 13
AB4
A
185 194Right-handed alpha
Helix 14
AB5
A
195 204Right-handed alpha
Helix 15
AB6
A
210 222Right-handed alpha
Helix 16
AB7
A
230 235Right-handed alpha
Helix 17
AB8
A
261 271Right-handed alpha
Helix 18
AB9
A
272 275Right-handed 310
Helix 19
AC1
A
278 282Right-handed 310
Helix 20
AC2
A
287 297Right-handed alpha
Helix 21
AC3
A
300 311Right-handed alpha
Helix 22
AC4
A
313 323Right-handed alpha
Helix 23
AC5
B
7 11Right-handed 310
Helix 24
AC6
B
24 30Right-handed alpha
Helix 25
AC7
B
32 43Right-handed alpha
Helix 26
AC8
B
49 59Right-handed 310
Helix 27
AC9
B
62 73Right-handed alpha
Helix 28
AD1
B
77 80Right-handed 310
Helix 29
AD2
B
81 88Right-handed alpha
Helix 30
AD3
B
93 128Right-handed alpha
Helix 31
AD4
B
130 145Right-handed alpha
Helix 32
AD5
B
145 153Right-handed alpha
Helix 33
AD6
B
161 172Right-handed alpha
Helix 34
AD7
B
173 180Right-handed alpha
Helix 35
AD8
B
185 194Right-handed alpha
Helix 36
AD9
B
195 205Right-handed alpha
Helix 37
AE1
B
209 222Right-handed alpha
Helix 38
AE2
B
223 227Right-handed 310
Helix 39
AE3
B
230 237Right-handed alpha
Helix 40
AE4
B
261 272Right-handed alpha
Helix 41
AE5
B
273 275Right-handed 310
Helix 42
AE6
B
278 282Right-handed 310
Helix 43
AE7
B
287 296Right-handed alpha
Helix 44
AE8
B
300 311Right-handed alpha
Helix 45
AE9
B
313 334Right-handed alpha
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There are no sheets in PDB entry 6M6Q
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il