Analysis of interatomic Contacts of Structural Units in PDB entry:
6M73


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6M73 entry

There is 1 chain in PDB entry 6M73 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 4MET 367
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 18 helices in PDB entry 6M73. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 26Right-handed alpha
Helix 2
AA2
A
27 29Right-handed 310
Helix 3
AA3
A
31 40Right-handed alpha
Helix 4
AA4
A
45 54Right-handed alpha
Helix 5
AA5
A
93 97Right-handed 310
Helix 6
AA6
A
100 113Right-handed alpha
Helix 7
AA7
A
125 134Right-handed alpha
Helix 8
AA8
A
148 162Right-handed alpha
Helix 9
AA9
A
179 186Right-handed alpha
Helix 10
AB1
A
193 197Right-handed 310
Helix 11
AB2
A
206 214Right-handed alpha
Helix 12
AB3
A
219 231Right-handed alpha
Helix 13
AB4
A
241 251Right-handed alpha
Helix 14
AB5
A
260 264Right-handed 310
Helix 15
AB6
A
271 284Right-handed alpha
Helix 16
AB7
A
297 307Right-handed alpha
Helix 17
AB8
A
315 349Right-handed alpha
Helix 18
AB9
A
352 358Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 6M73. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 59first strand
Strand 2
A
362 363anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 77first strand
Strand 2
A
80 82anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 88first strand
Strand 2
A
116 118parallel
Strand 3
A
139 143parallel
Strand 4
A
167 170parallel
Strand 5
A
234 237parallel
Strand 6
A
255 258parallel
Strand 7
A
289 291parallel
Strand 8
A
311 314parallel
Strand 9
A
86 88parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il