Analysis of interatomic Contacts of Structural Units in PDB entry:
6M7B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6M7B entry

There are 4 chains in PDB entry 6M7B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 9LYS 209
B
 ASP 8ALA 207
C
 PHE 38THR 73
D
 PHE 38THR 73
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6M7B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 34Right-handed alpha
Helix 2
AA2
A
38 40Right-handed 310
Helix 3
AA3
A
57 77Right-handed alpha
Helix 4
AA4
A
114 132Right-handed alpha
Helix 5
AA5
A
133 136Right-handed 310
Helix 6
AA6
A
155 158Right-handed 310
Helix 7
AA7
A
159 164Right-handed alpha
Helix 8
AA8
A
175 180Right-handed alpha
Helix 9
AA9
B
10 34Right-handed alpha
Helix 10
AB1
B
38 40Right-handed 310
Helix 11
AB2
B
57 77Right-handed alpha
Helix 12
AB3
B
114 132Right-handed alpha
Helix 13
AB4
B
133 137Right-handed 310
Helix 14
AB5
B
157 164Right-handed alpha
Helix 15
AB6
B
175 180Right-handed alpha
Helix 16
AB7
C
61 72Right-handed alpha
Helix 17
AB8
D
61 73Right-handed alpha
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There are 6 sheets in PDB entry 6M7B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 47first strand
Strand 2
A
50 55anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 152first strand
Strand 2
A
80 88anti-parallel
Strand 3
A
94 103anti-parallel
Strand 4
A
198 205anti-parallel
Strand 5
A
185 193anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 173first strand
Strand 2
D
51 53anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
42 47first strand
Strand 2
B
50 55anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 152first strand
Strand 2
B
80 88anti-parallel
Strand 3
B
94 103anti-parallel
Strand 4
B
198 205anti-parallel
Strand 5
B
185 192anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
171 173first strand
Strand 2
C
51 53anti-parallel
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